Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS06510 and MMP_RS06515 are separated by 96 nucleotidesMMP_RS06515 and MMP_RS06520 are separated by 138 nucleotidesMMP_RS06520 and MMP_RS06525 are separated by 16 nucleotidesMMP_RS06525 and MMP_RS06530 are separated by 39 nucleotides MMP_RS06510: MMP_RS06510 - Glu-tRNA(Gln) amidotransferase subunit GatD, at 1,250,346 to 1,251,602 _RS06510 MMP_RS06515: MMP_RS06515 - UPF0489 family protein, at 1,251,699 to 1,252,409 _RS06515 MMP_RS06520: MMP_RS06520 - DUF1786 domain-containing protein, at 1,252,548 to 1,253,564 _RS06520 MMP_RS06525: MMP_RS06525 - YciI family protein, at 1,253,581 to 1,253,871 _RS06525 MMP_RS06530: MMP_RS06530 - bifunctional hexulose-6-phosphate synthase/ribonuclease regulator, at 1,253,911 to 1,255,227 _RS06530
Group Condition MMP_RS06510 MMP_RS06515 MMP_RS06520 MMP_RS06525 MMP_RS06530
natural competence H2 McCas- cells grown in liquid medium with neomycin N.D. +0.5 -0.0 -3.7 -0.5
stress McCas_H2_complete Chlorite 1.25 mM N.D. -0.0 -0.4 -2.4 -0.5
stress McCas_H2_complete Chloride 250 mM N.D. +0.3 -0.1 -2.8 -0.5
no stress control McCas_H2_complete no stress control N.D. -1.0 +0.1 -1.1 -0.9
stress McCas_formate_complete metavanadate 4.54545454545455 mM N.D. +0.3 -0.2 -3.1 +0.3
nitrogen source H2 N-free with 10mM B-Alanine N.D. +0.1 +0.2 -2.6 -0.4
nutrient t2 Formate deepwell autotrophic conditions N.D. +0.1 +0.3 -0.9 -2.1
stress McCas_H2_complete Rifampicin 0.5 mM N.D. -0.7 +0.5 -1.1 -1.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. -1.0 +0.1 -2.0 +0.5
no stress control McCas_H2_complete no stress control N.D. -0.3 +0.6 -2.0 -0.5
stress McCas_H2_complete Anhydrotetracycline 0.05 mM N.D. -0.2 +0.8 -1.1 -1.1
stress McCas_formate_complete gold (III) chloride 0.0714285714285714 mM N.D. -1.1 +1.0 -1.6 +0.2
stress McCas_H2_complete metavanadate 4.54545454545455 mM N.D. +1.0 +0.3 -2.1 -0.7
stress McCas_H2_complete silver chloride 0.5 mM N.D. +1.1 +0.1 -1.1 -1.4
stress McCas_H2_complete metronidazole 0.000833333333333333 N.D. +0.9 +0.6 -2.1 -0.6
stress McCas_H2_complete phosphate monobasic 83.3333333333333 mM N.D. +0.9 +0.6 -1.0 -1.0
stress Formate with Bacitracin 15.6 uM N.D. +0.5 +0.1 -2.3 +1.3
stress McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM N.D. +0.7 +1.2 -1.5 -0.6
stress Formate with Nitrofurantoin 0.25 mM N.D. -0.7 +0.3 -1.3 +1.6
stress Formate with Nitrofurantoin 0.25 mM N.D. -0.4 +0.3 -1.1 +1.4
stress McCas_H2_complete Cesium chloride 41.6666666666667 mM N.D. -1.0 +1.0 -0.8 +1.1
no stress control McCas_H2_complete no stress control N.D. +1.8 +0.5 -1.2 -0.5
stress Formate McCas no stress control 2 N.D. -0.7 +0.9 +0.8 +1.0
stress McCas_H2_complete dimetridazole 0.000833333333333333 mM N.D. +2.0 +1.1 +0.1 -0.8
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM N.D. +0.7 +0.5 +0.6 +1.4
stress Formate with nitrate 62.5 mM N.D. +0.5 +0.6 +0.5 +1.6
stress Formate with nitrate 62.5 mM N.D. +0.8 +0.4 +0.3 +1.9
stress McCas_formate_complete Novobiocin 0.025 mM N.D. +0.6 +0.6 +2.0 +0.2
stress McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM N.D. -0.5 +0.3 +5.1 -0.5
stress McCas_formate_complete nitrate 35.7142857142857 mM N.D. +1.8 +0.3 +0.8 +1.4
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