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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS06435 and MMP_RS06440 are separated by 22 nucleotides
MMP_RS06440 and MMP_RS06445 are separated by 119 nucleotides
MMP_RS06445 and MMP_RS06450 are separated by 60 nucleotides
MMP_RS06450 and MMP_RS06455 are separated by 40 nucleotides
MMP_RS06435: MMP_RS06435 - CBS domain-containing protein, at 1,234,459 to 1,235,019
_RS06435
MMP_RS06440: MMP_RS06440 - CBS domain-containing protein, at 1,235,042 to 1,235,881
_RS06440
MMP_RS06445: MMP_RS06445 - DUF89 domain-containing protein, at 1,236,001 to 1,236,900
_RS06445
MMP_RS06450: MMP_RS06450 - phosphoribosylformylglycinamidine cyclo-ligase, at 1,236,961 to 1,238,010
_RS06450
MMP_RS06455: MMP_RS06455 - phenylalanine--tRNA ligase subunit beta, at 1,238,051 to 1,239,715
_RS06455
Group
Condition
MMP
_RS06435
MMP
_RS06440
MMP
_RS06445
MMP
_RS06450
MMP
_RS06455
no stress control
McCas_H2_complete no stress control
-1.3
-0.1
-1.0
N.D.
N.D.
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
-1.6
-0.1
-0.6
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Glutamic
-1.7
+0.4
-1.0
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Glutamic
-1.2
+0.1
-0.8
N.D.
N.D.
nitrogen source
H2 N-free with 10mM NAG
-0.6
+0.3
-1.5
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Putrescine
-0.9
+0.2
-1.0
N.D.
N.D.
no stress control
McCas_H2_complete no stress control
-1.0
+0.3
-0.7
N.D.
N.D.
stress
McCas_H2_complete Chlorpromazine 0.0333333333333333 mM
-0.8
+0.4
-1.0
N.D.
N.D.
stress
McCas_H2_complete 2-Mercaptopyridine N-oxide 0.02 mM
-1.4
+0.4
-0.5
N.D.
N.D.
nutrient t2
H2 deepwell acetate and vitamin FREE
-1.6
+0.7
-0.4
N.D.
N.D.
stress
McCas_H2_complete Phenazine ethosulfate 0.1 mM
-1.1
+0.5
-0.6
N.D.
N.D.
nutrient t2
H2 deepwell vitamin FREE
-1.8
+0.6
+0.2
N.D.
N.D.
nutrient t2
H2 deepwell acetate FREE
-1.7
+0.1
+0.6
N.D.
N.D.
rich t2
H2 McCas deepwell complete
-2.3
+0.8
+0.6
N.D.
N.D.
nitrogen source
H2 N-free with 5mM Inosine
-1.5
+0.7
-0.0
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Threonine
-0.4
+0.8
-1.1
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Cytidine
-0.7
+0.8
-0.7
N.D.
N.D.
stress
McCas_H2_complete sodium iodide 250 mM
-0.4
+1.0
-0.7
N.D.
N.D.
nutrient t2
H2 deepwell acetate FREE
-1.4
+1.4
-0.0
N.D.
N.D.
stress
McCas_H2_complete sulfate 125 mM
+0.8
+1.0
-0.4
N.D.
N.D.
stress
McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM
-0.6
+1.3
+0.7
N.D.
N.D.
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
+1.4
-0.1
+0.6
N.D.
N.D.
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
+0.8
+0.7
+0.6
N.D.
N.D.
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
+0.3
+1.2
+0.6
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Uridine
+3.0
-0.3
-0.5
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Uridine
+3.4
-0.2
-0.6
N.D.
N.D.
stress
McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM
+0.7
+1.1
+0.8
N.D.
N.D.
stress
Formate 100 mM hypophosphite
+1.5
+0.9
+0.6
N.D.
N.D.
stress
Formate 100 mM hypophosphite
+1.2
+1.2
+0.8
N.D.
N.D.
stress
McCas_formate_complete nitrate 35.7142857142857 mM
+3.1
+0.3
+1.2
N.D.
N.D.
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