Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS06350 and MMP_RS06355 overlap by 8 nucleotidesMMP_RS06355 and MMP_RS06360 are separated by 38 nucleotidesMMP_RS06360 and MMP_RS06365 are separated by 30 nucleotidesMMP_RS06365 and MMP_RS06370 are separated by 78 nucleotides MMP_RS06350: MMP_RS06350 - HesA/MoeB/ThiF family protein, at 1,221,654 to 1,222,373 _RS06350 MMP_RS06355: MMP_RS06355 - molybdenum cofactor biosynthesis protein MoaE, at 1,222,366 to 1,222,791 _RS06355 MMP_RS06360: MMP_RS06360 - UPF0280 family protein, at 1,222,830 to 1,223,573 _RS06360 MMP_RS06365: MMP_RS06365 - hypothetical protein, at 1,223,604 to 1,223,804 _RS06365 MMP_RS06370: MMP_RS06370 - biotin synthase BioB, at 1,223,883 to 1,224,866 _RS06370
Group Condition MMP_RS06350 MMP_RS06355 MMP_RS06360 MMP_RS06365 MMP_RS06370
nutrient t2 Formate deepwell autotrophic conditions -7.6 -8.9 N.D. -0.7 -6.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -9.1 -8.9 N.D. -0.0 -5.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -11.4 -10.8 N.D. +0.2 -1.0
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -9.1 -7.1 N.D. +0.1 -6.4
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -8.3 -8.9 N.D. -0.1 -5.2
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -8.9 -8.8 N.D. -0.2 -4.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -11.0 -10.4 N.D. -0.2 -0.6
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -7.6 -8.7 N.D. +0.1 -5.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -11.0 -10.4 N.D. -0.2 -0.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -11.0 -10.5 N.D. -0.3 -0.2
nutrient t2 H2 deepwell vitamin and casamino FREE -4.8 -8.8 N.D. -0.1 -8.1
nutrient t2 H2 deepwell vitamin FREE -6.8 -8.3 N.D. -0.3 -6.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -11.0 -10.4 N.D. -0.2 -0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -10.6 -10.0 N.D. +0.1 -1.1
nutrient t2 Formate deepwell autotrophic conditions -9.0 -7.3 N.D. -0.4 -4.5
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -7.2 -8.6 N.D. -0.5 -4.8
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -6.6 -7.2 N.D. -0.3 -6.9
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -4.4 -8.3 N.D. -0.1 -7.9
nutrient t2 Formate deepwell vitamin and casamino FREE -7.6 -7.1 N.D. -0.1 -5.9
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -8.0 -9.1 N.D. +0.1 -3.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -9.4 -10.6 N.D. +0.1 -0.5
nutrient t2 Formate deepwell acetate FREE -7.1 -8.7 N.D. +0.0 -4.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -9.1 -5.7 N.D. -0.1 -5.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -10.1 -9.5 N.D. -0.1 -0.3
nutrient t1 Formate deepwell casamino FREE -7.8 -7.3 N.D. -0.3 -4.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -6.3 -9.1 N.D. -0.1 -4.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -8.6 -9.8 N.D. -0.1 -1.1
nutrient t2 Formate deepwell acetate and vitamin FREE -4.6 -9.0 N.D. -0.2 -5.5
rich t2 H2 McCas deepwell complete -6.1 -8.3 N.D. -0.3 -4.5
nutrient t2 Formate deepwell acetate and casamino FREE -6.4 -9.1 N.D. -0.4 -3.3
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