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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS06135 and MMP_RS06140 are separated by 119 nucleotides
MMP_RS06140 and MMP_RS06145 are separated by 625 nucleotides
MMP_RS06145 and MMP_RS06150 are separated by 56 nucleotides
MMP_RS06150 and MMP_RS06155 are separated by 103 nucleotides
MMP_RS06135: MMP_RS06135 - methenyltetrahydromethanopterin cyclohydrolase, at 1,173,159 to 1,174,130
_RS06135
MMP_RS06140: MMP_RS06140 - radical SAM protein, at 1,174,250 to 1,175,365
_RS06140
MMP_RS06145: MMP_RS06145 - hypothetical protein, at 1,175,991 to 1,180,484
_RS06145
MMP_RS06150: MMP_RS06150 - hypothetical protein, at 1,180,541 to 1,182,589
_RS06150
MMP_RS06155: MMP_RS06155 - DUF4186 domain-containing protein, at 1,182,693 to 1,183,064
_RS06155
Group
Condition
MMP
_RS06135
MMP
_RS06140
MMP
_RS06145
MMP
_RS06150
MMP
_RS06155
stress
Formate McCas no stress control 2
N.D.
-0.6
+0.2
-0.3
-3.0
nutrient t2
H2 deepwell acetate and casamino FREE
N.D.
-0.4
+0.3
+0.0
-2.5
nutrient t2
Formate deepwell acetate FREE
N.D.
-0.6
+0.1
-0.1
-1.7
stress
McCas_formate_complete metavanadate 4.54545454545455 mM
N.D.
-1.6
-0.0
-0.1
-0.1
stress
McCas_formate_complete Magnesium chloride 250 mM
N.D.
-0.1
+0.1
-0.1
-1.6
no stress control
McCas_formate_complete no stress control
N.D.
-0.5
+0.1
+0.0
-1.2
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
N.D.
-0.3
-0.1
+0.2
-1.2
nutrient t1
Mc formate, casamino free, with 10mM L-Ornithine
N.D.
-0.9
-0.2
+0.3
-0.5
stress
McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
N.D.
+0.5
-0.2
-0.3
-0.9
stress
Formate 100 mM hypophosphite
N.D.
-1.3
-0.0
+0.1
+0.2
stress
McCas_formate_complete Lithium chloride 125 mM
N.D.
-0.2
+0.1
+0.6
-0.8
stress
McCas_H2_complete Calcium Chloride Dihydrate 83.3333333333333 mM
N.D.
-0.6
+0.2
+0.9
-0.7
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
N.D.
+0.2
+0.0
+0.7
-0.9
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
N.D.
-0.7
-0.2
+0.5
+0.5
nutrient t2
H2 deepwell acetate and vitamin FREE
N.D.
-0.8
+0.2
+0.8
+0.2
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
N.D.
-0.6
+0.0
+0.7
+0.4
nitrogen source
H2 N-free with 10mM Gly-D-Asp
N.D.
-0.2
+0.5
+0.8
-0.3
stress
McCas_H2_complete bromate 50 mM
N.D.
-0.4
-0.1
+0.2
+1.1
no stress control
McCas_H2_complete no stress control
N.D.
-0.4
-0.1
+0.3
+1.2
nutrient t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
N.D.
+1.1
+0.4
-0.2
-0.0
no stress control
McCas_H2_complete no stress control
N.D.
-0.5
-0.1
+0.3
+1.9
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
N.D.
+0.5
+0.1
+0.7
+0.4
nutrient t2
H2 deepwell acetate FREE
N.D.
+0.3
+0.1
+0.5
+0.9
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
N.D.
+0.8
+0.1
+0.2
+0.9
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
N.D.
+0.8
+0.0
+0.4
+0.8
stress
McCas_H2_complete Chlorate 250 mM
N.D.
+0.9
+0.1
+0.6
+0.6
stress
McCas_H2_complete Anhydrotetracycline 0.05 mM
N.D.
+0.5
+0.2
+0.5
+1.0
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
N.D.
+0.8
+0.2
+0.6
+0.8
rich t2
H2 McCas deepwell complete
N.D.
+0.8
+0.2
+0.6
+1.1
stress
McCas_H2_complete Antimycin A 0.01 mM
N.D.
+0.7
+0.2
+0.3
+1.6
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