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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS06045 and MMP_RS06050 are separated by 122 nucleotides
MMP_RS06050 and MMP_RS06055 are separated by 219 nucleotides
MMP_RS06055 and MMP_RS06060 are separated by 141 nucleotides
MMP_RS06060 and MMP_RS06065 are separated by 153 nucleotides
MMP_RS06045: MMP_RS06045 - DNA polymerase, at 1,155,257 to 1,155,808
_RS06045
MMP_RS06050: MMP_RS06050 - ZIP family metal transporter, at 1,155,931 to 1,156,740
_RS06050
MMP_RS06055: MMP_RS06055 - peroxiredoxin, at 1,156,960 to 1,157,613
_RS06055
MMP_RS06060: MMP_RS06060 - hypothetical protein, at 1,157,755 to 1,158,837
_RS06060
MMP_RS06065: MMP_RS06065 - iron ABC transporter substrate-binding protein, at 1,158,991 to 1,160,114
_RS06065
Group
Condition
MMP
_RS06045
MMP
_RS06050
MMP
_RS06055
MMP
_RS06060
MMP
_RS06065
stress
Formate with Bacitracin 15.6 uM
-0.7
-0.4
-0.3
-0.3
-0.1
stress
McCas_formate_complete Chloride 250 mM
+0.2
-0.5
-0.9
+0.2
+0.3
no stress control
McCas_H2_complete no stress control
+0.6
-0.1
-0.7
-0.2
+0.2
stress
McCas_H2_complete gold (III) chloride 0.0357142857142857 mM
+0.3
+0.4
-0.6
-0.1
+0.3
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
+0.2
+0.3
+0.1
-0.7
+0.4
nitrogen source
H2 N-free with 5mM Inosine
+0.3
+0.4
-0.4
-0.1
+0.5
stress
McCas_H2_complete Irgasan 0.025 mM
+0.5
+0.4
-0.4
-0.2
+0.3
stress
McCas_H2_complete Antimycin A 0.01 mM
+0.4
+0.3
-0.6
+0.3
+0.3
nitrogen source
H2 N-free with 10mM Gly-Glu
+0.5
+0.3
-0.3
-0.2
+0.4
stress
McCas_H2_complete Chloride 250 mM
+0.4
+0.6
-0.5
+0.0
+0.2
stress
McCas_H2_complete Spiramycin 0.1 mM
+0.6
-0.2
-0.4
+0.0
+0.7
no stress control
McCas_H2_complete no stress control
+0.5
+0.1
-0.5
+0.6
+0.2
stress
McCas_H2_complete Rifampicin 0.5 mM
+0.2
+0.5
-0.4
+0.2
+0.4
no stress control
McCas_H2_complete no stress control
+0.9
-0.3
-0.3
+0.4
+0.3
stress
H2 McCas with 40 minute oxygen exposure
+0.5
-0.1
-0.3
+0.4
+0.5
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
-0.1
-0.2
+0.9
+0.2
+0.2
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
+0.3
+0.6
-0.4
+0.3
+0.3
nitrogen source
H2 N-free with 10mM L-tyrosine
+0.8
-0.2
+0.4
+0.5
-0.3
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
+0.5
+0.6
-0.3
-0.2
+0.5
nitrogen source
N2 fixation, H2 media
+0.4
-0.2
+0.4
+0.3
+0.4
nutrient t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
-0.0
+0.9
+0.5
-0.3
+0.3
stress
McCas_H2_complete metavanadate 4.54545454545455 mM
+0.4
+0.3
+0.2
-0.1
+0.6
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
+0.2
+0.7
+0.2
-0.2
+0.5
nutrient t2
H2 deepwell vitamin FREE
+0.9
-0.3
+0.1
+0.4
+0.5
nutrient t2
H2 deepwell acetate and vitamin FREE
+0.0
+0.5
+0.5
+0.3
+0.4
stress
McCas_H2_complete Chlorate 250 mM
+0.9
+0.5
-0.4
+0.3
+0.3
stress
McCas_H2_complete silver chloride 0.5 mM
+0.6
+0.7
-0.4
+0.5
+0.3
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
+0.6
+0.4
+0.1
+0.2
+0.4
rich t2
H2 McCas deepwell complete
+0.3
+0.1
+0.8
+0.4
+0.4
nutrient t2
H2 deepwell acetate FREE
+0.7
+0.4
+0.5
+0.2
+0.4
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