Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS05930 and MMP_RS05935 are separated by 76 nucleotidesMMP_RS05935 and MMP_RS05940 overlap by 1 nucleotidesMMP_RS05940 and MMP_RS05945 are separated by 173 nucleotidesMMP_RS05945 and MMP_RS05950 are separated by 59 nucleotides MMP_RS05930: MMP_RS05930 - 3-isopropylmalate dehydratase large subunit, at 1,137,792 to 1,139,066 _RS05930 MMP_RS05935: MMP_RS05935 - uroporphyrinogen decarboxylase family protein, at 1,139,143 to 1,140,201 _RS05935 MMP_RS05940: MMP_RS05940 - corrinoid protein, at 1,140,201 to 1,140,848 _RS05940 MMP_RS05945: MMP_RS05945 - CBS domain-containing protein, at 1,141,022 to 1,141,384 _RS05945 MMP_RS05950: MMP_RS05950 - nickel-dependent hydrogenase large subunit, at 1,141,444 to 1,142,571 _RS05950
Group Condition MMP_RS05930 MMP_RS05935 MMP_RS05940 MMP_RS05945 MMP_RS05950
nutrient t2 H2 deepwell vitamin and casamino FREE -7.0 +0.1 -0.4 -0.2 -3.3
nutrient t2 H2 deepwell casamino FREE -6.9 -0.2 -0.6 +0.0 -2.5
nutrient t2 H2 deepwell vitamin and casamino FREE -6.7 +0.1 -0.1 +0.5 -3.7
nutrient t2 H2 deepwell casamino FREE -6.9 +0.2 +0.2 +0.1 -3.1
nutrient t2 H2 deepwell vitamin and casamino FREE -6.5 +0.3 +0.2 +0.0 -3.3
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -7.1 +0.2 +0.0 -0.3 -2.2
nutrient t2 H2 deepwell autotrophic conditions -6.8 +0.2 -0.4 +0.0 -2.1
nutrient t2 H2 deepwell casamino FREE -7.1 -0.1 +0.3 +0.3 -2.4
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -6.8 -0.1 -0.1 -0.3 -1.5
nutrient t2 H2 deepwell autotrophic conditions -7.0 +0.2 +0.3 +0.0 -2.2
nutrient t2 H2 deepwell acetate FREE -6.7 +0.3 +0.2 -0.1 -2.2
nutrient t2 H2 deepwell autotrophic conditions -6.1 +0.2 +0.1 -0.7 -1.8
nutrient t2 H2 deepwell acetate and casamino FREE -6.7 -0.1 +0.4 -0.4 -1.3
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -7.1 -0.0 +0.2 +0.2 -1.4
nutrient t2 H2 deepwell autotrophic conditions -6.5 +0.0 +0.1 -0.0 -1.7
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -7.1 +0.1 +0.3 +0.1 -1.4
nutrient t1 Formate deepwell casamino FREE -7.4 -0.0 -0.3 +0.0 +0.0
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -6.0 +0.2 -0.1 -0.4 -1.1
nutrient t2 H2 deepwell acetate and casamino FREE -5.8 +0.0 +0.1 +0.0 -1.7
nutrient t2 H2 deepwell acetate and casamino FREE -5.3 +0.1 +0.1 -0.2 -1.8
nutrient t2 H2 deepwell acetate and vitamin FREE -5.6 +0.2 -0.0 +0.8 -2.4
nutrient t2 Formate deepwell vitamin and casamino FREE -7.1 -0.0 -0.1 -0.1 +0.6
nutrient t2 Formate deepwell vitamin and casamino FREE -7.1 -0.0 -0.0 +0.0 +0.5
nutrient t2 Formate deepwell vitamin and casamino FREE -6.9 -0.0 +0.1 +0.2 +0.6
stress McCas_formate_complete mercury (II) chloride 0.227272727272727 mM -6.3 -0.0 -0.4 +0.5 +0.3
nutrient t2 H2 deepwell acetate FREE -4.4 +0.3 +0.7 -0.1 -2.2
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -6.7 +0.3 +0.0 -0.1 +1.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -6.0 +0.0 -0.3 -0.3 +1.5
nutrient t2 Formate deepwell autotrophic conditions -6.2 +0.1 +0.1 +0.3 +0.8
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -6.1 +0.0 +0.1 +0.0 +2.0
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