Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS05830 and MMP_RS05835 are separated by 114 nucleotidesMMP_RS05835 and MMP_RS05840 are separated by 74 nucleotidesMMP_RS05840 and MMP_RS05845 are separated by 186 nucleotidesMMP_RS05845 and MMP_RS05850 are separated by 17 nucleotides MMP_RS05830: MMP_RS05830 - peptidyl-prolyl cis-trans isomerase, at 1,119,759 to 1,120,247 _RS05830 MMP_RS05835: MMP_RS05835 - secondary thiamine-phosphate synthase enzyme YjbQ, at 1,120,362 to 1,120,760 _RS05835 MMP_RS05840: MMP_RS05840 - peptide chain release factor aRF-1, at 1,120,835 to 1,122,094 _RS05840 MMP_RS05845: MMP_RS05845 - tRNA-intron lyase, at 1,122,281 to 1,122,814 _RS05845 MMP_RS05850: MMP_RS05850 - Ldh family oxidoreductase, at 1,122,832 to 1,123,875 _RS05850
Group Condition MMP_RS05830 MMP_RS05835 MMP_RS05840 MMP_RS05845 MMP_RS05850
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -0.1 -5.7 N.D. -5.8 -2.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -0.1 +0.3 N.D. -7.1 -3.0
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM -0.4 -1.3 N.D. -6.9 -1.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -0.1 -0.0 N.D. -6.7 -2.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -0.3 +0.5 N.D. -6.8 -3.0
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -0.6 -0.4 N.D. -6.2 -2.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.1 -0.5 N.D. -6.5 -2.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -0.2 +0.0 N.D. -6.9 -2.0
nutrient t2 H2 deepwell casamino FREE -0.3 -3.6 N.D. -4.9 -0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -0.1 +0.3 N.D. -6.3 -2.8
nutrient t2 H2 deepwell acetate and vitamin FREE +0.2 -3.1 N.D. -3.3 -2.4
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -0.8 -0.5 N.D. -6.2 -1.1
nutrient t2 H2 deepwell acetate FREE -0.5 +0.3 N.D. -6.0 -2.2
nutrient t2 Formate deepwell acetate FREE -0.7 -0.8 N.D. -4.7 -2.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations -0.3 -0.3 N.D. -6.7 -0.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations +0.0 -0.2 N.D. -6.7 -1.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -0.2 -0.2 N.D. -6.8 -0.8
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -0.7 -0.5 N.D. -5.5 -1.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -0.5 -0.4 N.D. -6.2 -0.5
stress H2 McCas with 1 mM polysulfide +0.1 +0.1 N.D. -7.4 -0.4
nutrient t2 H2 deepwell casamino FREE +0.4 +0.1 N.D. -6.3 -1.5
stress McCas_H2_complete Hydroxylamine 2.08333333333333 mM +0.3 -1.1 N.D. -4.9 -1.5
nutrient t2 H2 deepwell vitamin and casamino FREE -1.1 +0.5 N.D. -5.9 -0.5
nutrient t2 H2 deepwell acetate and vitamin FREE -0.7 +0.4 N.D. -4.8 -1.9
nutrient t2 H2 deepwell vitamin and casamino FREE +0.6 -0.1 N.D. -6.4 -0.6
nutrient t2 H2 deepwell acetate and vitamin FREE -0.5 +0.7 N.D. -5.0 -1.3
nutrient t2 Formate deepwell acetate and casamino FREE -0.1 +0.8 N.D. -3.1 -3.6
nutrient t2 Formate deepwell autotrophic conditions +0.4 +0.8 N.D. -2.8 -4.3
nutrient t2 H2 deepwell acetate FREE -0.5 +1.5 N.D. -4.4 -1.3
stress McCas_formate_complete Fluorophosphate 62.5 mM -0.9 -5.1 N.D. +1.8 +0.3
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