Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS05780 and MMP_RS05785 are separated by 125 nucleotidesMMP_RS05785 and MMP_RS05790 are separated by 43 nucleotidesMMP_RS05790 and MMP_RS05795 are separated by 48 nucleotidesMMP_RS05795 and MMP_RS05800 are separated by 43 nucleotides MMP_RS05780: MMP_RS05780 - multidrug resistance efflux transporter family protein, at 1,108,117 to 1,109,061 _RS05780 MMP_RS05785: MMP_RS05785 - ATP-binding protein, at 1,109,187 to 1,111,031 _RS05785 MMP_RS05790: MMP_RS05790 - HDIG domain-containing protein, at 1,111,075 to 1,111,638 _RS05790 MMP_RS05795: MMP_RS05795 - redox-regulated ATPase YchF, at 1,111,687 to 1,112,865 _RS05795 MMP_RS05800: MMP_RS05800 - B12-binding domain-containing radical SAM protein, at 1,112,909 to 1,114,225 _RS05800
Group Condition MMP_RS05780 MMP_RS05785 MMP_RS05790 MMP_RS05795 MMP_RS05800
nutrient t2 H2 deepwell acetate and vitamin FREE +0.3 -1.0 -0.5 -0.7 -2.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations +0.1 +0.1 -0.0 -0.7 -2.8
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations +0.1 +0.3 -0.1 -0.8 -2.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations +0.1 +0.2 +0.1 -0.9 -2.8
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +0.1 +0.4 -0.2 -1.3 -2.0
stress McCas_H2_complete Calcium Chloride Dihydrate 83.3333333333333 mM -0.0 -1.0 +0.1 -0.9 -1.2
nutrient t2 H2 deepwell acetate and vitamin FREE -0.1 -0.8 +0.1 -0.6 -1.7
nutrient t2 H2 deepwell acetate FREE +0.3 -0.9 +0.5 -0.4 -2.3
stress Formate 100 mM hypophosphite -0.1 -0.2 -0.4 -2.3 +0.3
stress H2 McCas with 40 minute oxygen exposure +0.1 -1.5 +0.2 -0.1 -1.2
nutrient t2 H2 deepwell acetate and vitamin FREE +0.5 -0.7 +0.2 -0.9 -1.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -0.0 +0.2 +0.2 -1.7 -1.1
stress McCas_formate_complete Antimycin A 0.01 mM +0.0 -0.8 +0.4 -1.4 -0.7
stress H2 McCas with 40 minute oxygen exposure +0.2 -1.5 +0.2 +0.0 -1.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.3 +1.0 -0.3 -0.6 -2.6
stress McCas_formate_complete nitrate 35.7142857142857 mM +0.1 +0.0 -0.7 -2.2 +0.7
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.3 +0.6 +0.0 -0.3 -2.5
nutrient t2 H2 deepwell acetate FREE +0.3 -0.9 +0.7 +0.0 -1.7
stress H2 McCas with 40 minute oxygen exposure +0.1 -1.4 +0.5 +0.2 -1.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.3 +0.9 -0.0 -0.8 -2.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.2 +0.5 +0.1 -0.9 -1.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +0.1 +0.6 +0.2 -1.2 -1.3
nutrient t2 H2 deepwell vitamin FREE +0.3 -0.9 +0.6 +0.6 -2.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.3 +0.7 +0.0 -0.8 -1.6
nutrient t2 H2 deepwell acetate FREE +0.5 -0.6 +0.3 +0.3 -1.8
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 +0.3 +0.5 +0.2 -0.9 -1.4
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.4 +1.4 -0.2 -0.4 -2.4
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.3 +0.8 +0.0 -0.5 -1.8
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.3 +0.9 +0.1 -0.3 -1.6
stress McCas_H2_complete Anhydrotetracycline 0.05 mM +0.6 +0.5 +0.3 -0.8 -0.8
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