Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS05695 and MMP_RS05700 overlap by 4 nucleotidesMMP_RS05700 and MMP_RS05705 are separated by 49 nucleotidesMMP_RS05705 and MMP_RS05710 are separated by 57 nucleotidesMMP_RS05710 and MMP_RS05715 are separated by 12 nucleotides MMP_RS05695: MMP_RS05695 - phospholipase D-like domain-containing protein, at 1,094,601 to 1,095,176 _RS05695 MMP_RS05700: MMP_RS05700 - TfuA-related McrA-glycine thioamidation protein, at 1,095,173 to 1,095,817 _RS05700 MMP_RS05705: MMP_RS05705 - aspartate carbamoyltransferase regulatory subunit, at 1,095,867 to 1,096,313 _RS05705 MMP_RS05710: MMP_RS05710 - ADP-forming succinate--CoA ligase subunit beta, at 1,096,371 to 1,097,459 _RS05710 MMP_RS05715: MMP_RS05715 - hypothetical protein, at 1,097,472 to 1,097,783 _RS05715
Group Condition MMP_RS05695 MMP_RS05700 MMP_RS05705 MMP_RS05710 MMP_RS05715
stress McCas_H2_complete Phenazine ethosulfate 0.1 mM -1.8 -2.9 N.D. N.D. +0.2
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM -0.9 -3.5 N.D. N.D. +0.1
stress McCas_H2_complete nitrate 35.7142857142857 mM -1.8 -2.8 N.D. N.D. +0.3
stress McCas_H2_complete Phenazine methosulfate 0.0333333333333333 mM -1.6 -2.9 N.D. N.D. +0.3
stress McCas_H2_complete Phenazine ethosulfate 0.1 mM -1.8 -2.4 N.D. N.D. +0.2
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -1.7 -2.0 N.D. N.D. +0.3
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM -0.9 -2.6 N.D. N.D. +0.0
stress McCas_H2_complete Phenazine methosulfate 0.0333333333333333 mM -1.2 -2.2 N.D. N.D. +0.2
stress Formate with nitrate 62.5 mM -0.2 -2.9 N.D. N.D. -0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -2.6 -0.8 N.D. N.D. +0.4
stress McCas_formate_complete nitrate 35.7142857142857 mM -0.3 -2.0 N.D. N.D. -0.5
stress McCas_H2_complete 8-hydroxy-nitroquinolone 0.0166666666666667 mM -2.3 -0.3 N.D. N.D. +0.1
nitrogen source H2 N-free with 10mM L-tyrosine -1.5 -0.4 N.D. N.D. -0.5
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -1.6 -1.0 N.D. N.D. +0.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -0.9 -2.0 N.D. N.D. +0.5
stress Formate with nitrate 62.5 mM -0.1 -2.3 N.D. N.D. +0.0
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -1.2 -1.0 N.D. N.D. +0.2
stress McCas_H2_complete Nitrofurantoin 0.1 mM -2.3 -0.0 N.D. N.D. +0.3
stress McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM -1.8 -0.5 N.D. N.D. +0.2
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -0.7 -1.4 N.D. N.D. +0.4
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -0.1 -1.8 N.D. N.D. +0.5
stress McCas_H2_complete Irgasan 0.025 mM -1.5 -0.3 N.D. N.D. +0.7
stress McCas_H2_complete Thioridazine 0.1 mM -1.0 -0.6 N.D. N.D. +0.9
stress McCas_H2_complete Lithium chloride 250 mM -1.2 -0.3 N.D. N.D. +0.9
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM -1.2 -0.3 N.D. N.D. +1.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -0.4 -1.3 N.D. N.D. +1.2
nitrogen source H2 N-free with 10mM L-Threonine +1.1 -0.9 N.D. N.D. +0.5
stress McCas_H2_complete sodium iodide 250 mM +2.0 -1.4 N.D. N.D. +0.2
nitrogen source H2 N-free with 10mM L-Phenylalanine +1.2 -0.8 N.D. N.D. +0.5
stress McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM +2.3 -0.1 N.D. N.D. -0.3
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