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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS05650 and MMP_RS05655 are separated by 70 nucleotides
MMP_RS05655 and MMP_RS05660 are separated by 243 nucleotides
MMP_RS05660 and MMP_RS05665 are separated by 81 nucleotides
MMP_RS05665 and MMP_RS05670 are separated by 12 nucleotides
MMP_RS05650: MMP_RS05650 - phosphopantetheine adenylyltransferase, at 1,085,368 to 1,085,814
_RS05650
MMP_RS05655: MMP_RS05655 - phosphoenolpyruvate synthase, at 1,085,885 to 1,088,161
_RS05655
MMP_RS05660: MMP_RS05660 - phosphate ABC transporter substrate-binding protein, at 1,088,405 to 1,089,244
_RS05660
MMP_RS05665: MMP_RS05665 - phosphate ABC transporter permease subunit PstC, at 1,089,326 to 1,090,201
_RS05665
MMP_RS05670: MMP_RS05670 - phosphate ABC transporter permease PstA, at 1,090,214 to 1,091,080
_RS05670
Group
Condition
MMP
_RS05650
MMP
_RS05655
MMP
_RS05660
MMP
_RS05665
MMP
_RS05670
nutrient t2
H2 deepwell acetate and casamino FREE
N.D.
N.D.
-0.7
-1.0
-0.1
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
N.D.
N.D.
-0.5
-0.5
-0.4
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
N.D.
N.D.
-0.7
-0.5
-0.2
stress
Formate McCas no stress control 2
N.D.
N.D.
-0.7
-0.3
-0.2
nitrogen source
H2 N-free with 10mM L-tyrosine
N.D.
N.D.
-0.8
+0.5
-0.2
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
N.D.
N.D.
+0.4
-0.3
-0.5
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
N.D.
N.D.
+0.5
-0.1
-0.5
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
N.D.
N.D.
+0.7
-0.7
-0.1
stress
McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM
N.D.
N.D.
+0.8
-0.2
-0.4
nitrogen source
H2 N-free with 10mM B-Alanine
N.D.
N.D.
+0.8
-0.5
-0.1
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
N.D.
N.D.
+0.3
+0.4
-0.4
stress
McCas_H2_complete Rifampicin 0.5 mM
N.D.
N.D.
+0.4
+0.4
-0.5
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
N.D.
N.D.
+0.2
+0.6
-0.4
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
+0.5
+0.4
-0.5
nitrogen source
H2 N-free with 5mM Inosine
N.D.
N.D.
-0.2
+0.8
-0.1
stress
McCas_H2_complete Antimycin A 0.01 mM
N.D.
N.D.
+0.5
+0.3
-0.3
stress
McCas_H2_complete Anhydrotetracycline 0.05 mM
N.D.
N.D.
+0.2
+0.8
-0.3
nutrient t1
H2 deepwell acetate FREE
N.D.
N.D.
+0.7
+0.4
-0.3
stress
McCas_formate_complete rubidium chloride 62.5 mM
N.D.
N.D.
+0.2
+0.9
-0.4
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
+0.7
+0.5
-0.3
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
N.D.
N.D.
-0.4
+1.4
+0.1
stress
McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
N.D.
N.D.
+0.4
+1.0
-0.3
stress
McCas_H2_complete sulfate 125 mM
N.D.
N.D.
+0.6
+0.7
-0.3
stress
McCas_formate_complete Calcium Chloride Dihydrate 166.666666666667 mM
N.D.
N.D.
+0.3
+0.6
+0.2
stress
McCas_H2_complete Fluorophosphate 62.5 mM
N.D.
N.D.
+0.8
+0.6
-0.1
stress
McCas_H2_complete Sulfaquinoxaline 0.1 mM
N.D.
N.D.
+0.4
+0.9
+0.1
nutrient t2
H2 deepwell acetate FREE
N.D.
N.D.
+1.0
+0.9
-0.5
stress
McCas_formate_complete Chloride 250 mM
N.D.
N.D.
+0.6
+1.4
-0.3
no stress control
McCas_formate_complete no stress control
N.D.
N.D.
+0.4
+1.2
+0.0
nutrient t2
H2 deepwell vitamin FREE
N.D.
N.D.
+0.3
+1.1
+0.4
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