Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS05630 and MMP_RS05635 are separated by 30 nucleotidesMMP_RS05635 and MMP_RS05640 are separated by 124 nucleotidesMMP_RS05640 and MMP_RS05645 are separated by 72 nucleotidesMMP_RS05645 and MMP_RS05650 overlap by 4 nucleotides MMP_RS05630: MMP_RS05630 - flippase, at 1,081,000 to 1,082,502 _RS05630 MMP_RS05635: MMP_RS05635 - NAD-dependent epimerase/dehydratase family protein, at 1,082,533 to 1,083,411 _RS05635 MMP_RS05640: MMP_RS05640 - UTP--glucose-1-phosphate uridylyltransferase GalU, at 1,083,536 to 1,084,384 _RS05640 MMP_RS05645: MMP_RS05645 - AEC family transporter, at 1,084,457 to 1,085,371 _RS05645 MMP_RS05650: MMP_RS05650 - phosphopantetheine adenylyltransferase, at 1,085,368 to 1,085,814 _RS05650
Group Condition MMP_RS05630 MMP_RS05635 MMP_RS05640 MMP_RS05645 MMP_RS05650
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations N.D. -9.9 -7.7 +0.3 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. -10.4 -6.4 -0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations N.D. -10.3 -6.2 +0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. -3.1 -7.0 -0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. -2.7 -6.6 -0.0 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations N.D. -3.7 -5.6 +0.0 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. -2.5 -6.6 +0.0 N.D.
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 N.D. -3.6 -5.7 +0.3 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations N.D. -3.4 -5.0 +0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. -2.6 -5.4 -0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 10 generations N.D. -2.8 -4.7 -0.1 N.D.
stress McCas_formate_complete Rifampicin 0.5 mM N.D. -4.0 -3.5 +0.2 N.D.
rich t2 H2 McCas deepwell complete N.D. -4.0 -3.4 +0.2 N.D.
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM N.D. -1.9 -4.3 -0.4 N.D.
stress H2 McCas with 40 minute oxygen exposure N.D. -2.7 -3.4 -0.3 N.D.
stress H2 McCas with 1 mM Na2S N.D. -2.9 -3.3 -0.1 N.D.
stress H2 McCas with 0.1 mM Na2S N.D. -2.8 -3.3 -0.2 N.D.
stress H2 McCas with 1 mM (NH4)2S control N.D. -2.6 -3.5 -0.1 N.D.
stress H2 McCas with 40 minute oxygen exposure N.D. -2.8 -3.3 -0.1 N.D.
stress McCas_H2_complete Hydroxylamine 2.08333333333333 mM N.D. -2.8 -2.8 -0.4 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. -1.5 -4.3 -0.2 N.D.
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. -2.6 -3.4 +0.1 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE N.D. +1.6 -4.6 -0.1 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. +2.6 -5.2 +0.2 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. +1.9 -4.1 -0.1 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. +2.2 -4.1 +0.2 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. +2.4 -4.3 +0.2 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. +2.5 -3.3 +0.3 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. +3.7 -3.8 +0.1 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. +4.2 -3.7 +0.4 N.D.
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