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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS05605 and MMP_RS05610 are separated by 4 nucleotides
MMP_RS05610 and MMP_RS05615 are separated by 36 nucleotides
MMP_RS05615 and MMP_RS05620 are separated by 44 nucleotides
MMP_RS05620 and MMP_RS05625 are separated by 100 nucleotides
MMP_RS05605: MMP_RS05605 - archaellin sugar biosynthesis putative threonine transferase AglU, at 1,074,958 to 1,076,751
_RS05605
MMP_RS05610: MMP_RS05610 - archaellin sugar biosynthesis methyltransferase AglV, at 1,076,756 to 1,077,430
_RS05610
MMP_RS05615: MMP_RS05615 - radical SAM protein, at 1,077,467 to 1,078,429
_RS05615
MMP_RS05620: MMP_RS05620 - radical SAM protein, at 1,078,474 to 1,079,520
_RS05620
MMP_RS05625: MMP_RS05625 - glycosyltransferase, at 1,079,621 to 1,080,823
_RS05625
Group
Condition
MMP
_RS05605
MMP
_RS05610
MMP
_RS05615
MMP
_RS05620
MMP
_RS05625
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-1.0
-0.5
-0.2
-0.5
-1.0
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
-0.9
-0.5
-0.3
-0.5
-1.0
stress
McCas_H2_complete Rifampicin 0.5 mM
-0.8
-0.8
-0.1
-0.5
-0.8
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-0.9
-0.5
-0.3
-0.5
-0.9
stress
McCas_H2_complete Anhydrotetracycline 0.05 mM
-0.4
-0.5
-0.5
-0.6
-0.6
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
-0.4
-0.7
-0.4
-0.5
-0.4
stress
McCas_H2_complete Antimycin A 0.01 mM
-0.3
-0.6
-0.3
-0.2
-0.5
stress
McCas_H2_complete Spiramycin 0.1 mM
-0.2
-0.6
+0.0
-0.4
-0.6
stress
McCas_H2_complete Sulfaquinoxaline 0.1 mM
-0.3
-0.4
-0.3
-0.2
-0.5
stress
McCas_H2_complete silver chloride 0.5 mM
-0.4
-0.4
-0.2
-0.2
-0.5
stress
McCas_H2_complete sodium nitrite 1.04166666666667 mM
-0.5
-0.4
+0.0
-0.3
-0.6
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
-0.4
-0.5
-0.3
-0.4
-0.1
stress
McCas_H2_complete metronidazole 0.000833333333333333
-0.4
-0.6
-0.2
-0.1
-0.4
no stress control
McCas_H2_complete no stress control
-0.2
-0.4
-0.1
-0.4
-0.5
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
-0.3
-0.3
-0.2
-0.3
-0.5
nutrient t2
H2 deepwell vitamin FREE
-0.5
-0.2
-0.2
-0.2
-0.5
stress
McCas_H2_complete Chloride 500 mM
-0.3
-0.4
-0.1
-0.1
-0.7
stress
McCas_H2_complete gold (III) chloride 0.0357142857142857 mM
-0.2
-0.5
-0.2
-0.2
-0.4
no stress control
McCas_H2_complete no stress control
-0.4
-0.4
+0.1
-0.3
-0.4
nutrient t2
H2 deepwell acetate and vitamin FREE
-0.2
-0.1
-0.1
-0.5
-0.5
stress
H2 McCas with 0.1 mM (NH4)2S
-0.3
-0.2
-0.1
-0.4
-0.4
no stress control
McCas_H2_complete no stress control
-0.3
-0.4
-0.0
-0.2
-0.5
stress
McCas_H2_complete Anhydrotetracycline 0.05 mM
-0.3
-0.3
+0.0
-0.3
-0.5
rich t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE
-0.4
-0.1
-0.1
-0.5
-0.3
no stress control
McCas_H2_complete no stress control
-0.3
-0.7
+0.1
-0.2
-0.4
stress
McCas_H2_complete silver chloride 0.5 mM
-0.2
-0.4
+0.1
-0.3
-0.4
nutrient t2
H2 deepwell casamino FREE
-0.4
-0.3
+0.2
-0.2
-0.4
stress
Formate with Bacitracin 15.6 uM
+0.5
+0.2
-0.0
+0.4
+0.3
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
+0.3
+0.1
+0.3
+0.2
+0.4
nitrogen source
H2 N-free with 10mM NAG
+0.5
+0.5
-0.0
-0.0
+0.6
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