Fitness for 5 genes in Methanococcus maripaludis S2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MMP_RS05445	MMP_RS05450	MMP_RS05455	MMP_RS05460	MMP_RS05465
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations	-7.2	-10.8	-0.0	-2.1	+0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations	-9.0	-5.2	+0.4	-2.7	+0.0
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations	-5.0	-4.7	+0.1	-3.1	+0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations	-5.4	-4.1	+0.1	-0.9	+0.0
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations	-4.3	-3.3	+0.1	-2.5	+0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations	-3.9	-3.2	-0.0	-2.2	+0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations	-3.8	-3.0	+0.2	-2.5	+0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations	-3.3	-2.5	+0.0	-1.7	+0.0
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations	-3.5	-2.3	+0.1	-1.4	-0.0
stress	Formate 100 mM hypophosphite	-2.4	-2.1	-0.2	-1.9	-0.0
stress	Formate 100 mM hypophosphite	-2.1	-2.1	-0.2	-2.0	+0.0
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	-2.0	-1.5	+0.0	-2.4	+0.1
rich t2	Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE	-2.5	-2.0	+0.1	-1.3	+0.0
stress	Formate 100 mM hypophosphite	-2.0	-1.8	-0.0	-1.6	+0.0
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2	-2.0	-1.5	-0.0	-1.6	-0.0
nutrient t2	H2 deepwell acetate and vitamin FREE	-2.0	-1.1	-0.4	-1.9	+0.2
rich t2	Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE	-2.4	-1.7	+0.2	-1.0	+0.0
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	-1.5	-1.4	+0.1	-2.3	+0.2
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2	-1.8	-1.4	+0.1	-1.7	+0.1
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	-1.6	-0.9	+0.2	-2.2	+0.1
nutrient t2	H2 deepwell acetate FREE	-1.8	-0.4	+0.8	-1.9	+0.2
stress	McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM	-1.7	-1.6	+0.1	+1.5	-0.0
stress	Formate with nitrate 62.5 mM	+1.5	+1.6	+0.0	-3.8	-0.1
stress	Formate with nitrate 62.5 mM	+1.4	+1.3	+0.1	-3.0	-0.0
stress	McCas_formate_complete nitrate 35.7142857142857 mM	+1.9	+1.7	-1.2	-1.5	+0.1
natural competence	H2 McCas- cells grown in liquid medium with neomycin	+3.8	+3.3	+0.0	-0.9	-0.3
natural competence	H2 McCas- cells incubated with 5000 ng DNA (pDNA pLW40neo) then transferred and grown in liquid medium with neomycin	+4.0	+3.5	-0.3	-0.3	-0.1
natural competence	H2 McCas- cells grown in liquid medium with neomycin	+4.0	+4.2	+0.0	-0.3	+0.0
stress	Formate with Neomycin 12.5 mM	+4.6	+5.1	-0.2	+0.2	+0.0
natural competence	H2 McCas- cells grown in liquid medium with neomycin	+5.5	+5.5	+0.3	-0.6	+0.0