Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS05405 and MMP_RS05410 are separated by 46 nucleotidesMMP_RS05410 and MMP_RS05415 are separated by 21 nucleotidesMMP_RS05415 and MMP_RS05420 are separated by 56 nucleotidesMMP_RS05420 and MMP_RS09020 are separated by 7 nucleotides MMP_RS05405: MMP_RS05405 - V-type ATP synthase subunit B, at 1,038,524 to 1,039,912 _RS05405 MMP_RS05410: MMP_RS05410 - V-type ATP synthase subunit D, at 1,039,959 to 1,040,603 _RS05410 MMP_RS05415: MMP_RS05415 - DUF22 domain-containing protein, at 1,040,625 to 1,040,990 _RS05415 MMP_RS05420: MMP_RS05420 - DUF61 family protein, at 1,041,047 to 1,041,436 _RS05420 MMP_RS09020: MMP_RS09020 - hypothetical protein, at 1,041,444 to 1,041,620 _RS09020
Group Condition MMP_RS05405 MMP_RS05410 MMP_RS05415 MMP_RS05420 MMP_RS09020
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. N.D. -1.2 -2.1 -7.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. N.D. -1.2 -1.9 -7.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. N.D. -1.1 -1.8 -7.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. N.D. -0.9 -1.8 -7.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. N.D. -1.1 -1.5 -7.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. N.D. -1.6 -1.1 -7.1
nutrient t2 H2 deepwell acetate FREE N.D. N.D. -1.2 -1.3 -6.9
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE N.D. N.D. -1.3 -1.2 -6.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations N.D. N.D. -0.5 -1.1 -7.1
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. N.D. -0.9 -1.3 -6.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. N.D. -1.5 -0.4 -6.8
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 10 generations N.D. N.D. -0.5 -0.9 -7.3
nutrient t2 H2 deepwell vitamin and casamino FREE N.D. N.D. -0.7 -1.0 -6.9
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM N.D. N.D. -0.9 -0.7 -6.9
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. N.D. -0.4 -1.4 -6.6
nutrient t2 H2 deepwell vitamin and casamino FREE N.D. N.D. -1.0 -0.9 -6.5
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. N.D. -1.1 -1.4 -5.9
nutrient t2 H2 deepwell autotrophic conditions N.D. N.D. -0.7 -1.0 -6.6
nutrient t2 H2 deepwell autotrophic conditions N.D. N.D. -0.9 -0.9 -6.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. N.D. -1.3 -2.1 -4.8
nutrient t2 H2 deepwell vitamin FREE N.D. N.D. -0.2 -1.6 -6.4
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. N.D. -0.9 -0.6 -6.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations N.D. N.D. -0.4 -0.8 -6.7
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. N.D. -1.0 -0.5 -6.3
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 N.D. N.D. -0.9 -1.0 -5.9
nutrient t2 Formate deepwell autotrophic conditions N.D. N.D. -0.5 -0.2 -7.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. N.D. -1.2 -0.8 -5.7
nutrient t2 H2 deepwell acetate and casamino FREE N.D. N.D. -0.1 -0.7 -6.9
nutrient t1 Formate deepwell casamino FREE N.D. N.D. -0.3 -0.2 -7.2
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. N.D. -0.1 -0.8 -6.7
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