Fitness for 5 genes in Methanococcus maripaludis S2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 700 experiments or choose conditions or try the comparative fitness browser

500 ntMMP_RS05240 and MMP_RS05245 are separated by 64 nucleotidesMMP_RS05245 and MMP_RS05250 are separated by 117 nucleotidesMMP_RS05250 and MMP_RS05255 are separated by 205 nucleotidesMMP_RS05255 and MMP_RS05260 are separated by 41 nucleotides MMP_RS05240: MMP_RS05240 - carbamoyl-phosphate synthase large subunit, at 998,113 to 1,001,358 _RS05240 MMP_RS05245: MMP_RS05245 - archaeosine biosynthesis radical SAM protein RaSEA, at 1,001,423 to 1,002,490 _RS05245 MMP_RS05250: MMP_RS05250 - NFYB/HAP3 family transcription factor subunit, at 1,002,608 to 1,002,907 _RS05250 MMP_RS05255: MMP_RS05255 - CBS domain-containing protein, at 1,003,113 to 1,004,354 _RS05255 MMP_RS05260: MMP_RS05260 - aspartate kinase, at 1,004,396 to 1,005,802 _RS05260
Group Condition MMP_RS05240 MMP_RS05245 MMP_RS05250 MMP_RS05255 MMP_RS05260
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. -3.4 -7.0 -0.7 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. -3.4 -6.8 -0.6 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. -3.3 -6.7 -0.4 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. -3.1 -6.7 -0.3 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. -2.9 -6.7 -0.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. -2.6 -6.7 -0.6 N.D.
stress H2 McCas with 10 mM (NH4)2S N.D. -2.1 -6.9 -0.2 N.D.
stress H2 McCas with 10 mM Na2S N.D. -1.5 -7.1 -0.4 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. -1.9 -6.3 -0.8 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 10 generations N.D. -1.7 -6.8 -0.5 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE N.D. -4.6 -4.1 +0.0 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations N.D. -1.5 -6.6 -0.4 N.D.
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 N.D. -1.6 -4.3 -2.4 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations N.D. -1.5 -6.2 -0.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 10 generations N.D. -0.9 -6.8 -0.2 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. -1.8 -5.2 -0.2 N.D.
stress H2 McCas with 0.1 mM Na2S N.D. -2.0 -4.8 -0.3 N.D.
stress H2 McCas with 40 minute oxygen exposure N.D. -1.8 -5.1 -0.2 N.D.
nutrient t2 H2 deepwell acetate FREE N.D. -1.9 -4.6 -0.6 N.D.
stress H2 McCas with 1 mM Na2S N.D. -1.9 -4.5 -0.5 N.D.
nutrient t2 H2 deepwell casamino FREE N.D. -1.6 -4.6 -0.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 10 generations N.D. -1.5 -4.7 -0.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 10 generations N.D. -1.5 -4.8 -0.3 N.D.
stress H2 McCas with 1 mM (NH4)2S control N.D. -1.7 -4.5 -0.5 N.D.
stress H2 McCas with 1 mM (NH4)2S control N.D. -1.7 -4.4 -0.4 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. -2.4 -4.0 -0.0 N.D.
stress H2 McCas with 40 minute oxygen exposure N.D. -1.5 -4.9 -0.1 N.D.
nutrient t2 H2 deepwell casamino FREE N.D. -1.5 -4.5 -0.4 N.D.
nitrogen source H2 N-free with 10mM L-tyrosine N.D. +3.8 -2.0 -1.2 N.D.
stress Formate with Neomycin 12.5 mM N.D. +0.0 +6.5 +0.4 N.D.
remove
MMP_RS05240
plot
remove
MMP_RS05245
plot
remove
MMP_RS05250
remove
MMP_RS05255
plot
remove
MMP_RS05260
plot