Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS05135 and MMP_RS05140 are separated by 118 nucleotidesMMP_RS05140 and MMP_RS05145 overlap by 4 nucleotidesMMP_RS05145 and MMP_RS05150 are separated by 9 nucleotidesMMP_RS05150 and MMP_RS05155 are separated by 157 nucleotides MMP_RS05135: MMP_RS05135 - hypothetical protein, at 980,566 to 981,087 _RS05135 MMP_RS05140: MMP_RS05140 - helix-turn-helix transcriptional regulator, at 981,206 to 981,406 _RS05140 MMP_RS05145: MMP_RS05145 - hypothetical protein, at 981,403 to 981,789 _RS05145 MMP_RS05150: MMP_RS05150 - hypothetical protein, at 981,799 to 982,230 _RS05150 MMP_RS05155: MMP_RS05155 - hypothetical protein, at 982,388 to 982,651 _RS05155
Group Condition MMP_RS05135 MMP_RS05140 MMP_RS05145 MMP_RS05150 MMP_RS05155
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -0.2 -2.1 -1.4 +0.4 -0.8
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +0.1 -1.7 -1.1 -0.2 +0.1
nutrient t2 H2 deepwell vitamin FREE -0.7 -0.9 -0.3 -0.6 +0.1
stress Formate with Bacitracin 15.6 uM -0.2 -1.1 -0.2 -0.4 -0.2
stress Formate with nitrate 62.5 mM +0.1 -0.8 -0.5 -0.4 -0.4
nitrogen source H2 N-free with 10mM Glycine -0.2 -1.2 -0.7 -0.1 +0.3
nitrogen source H2 N-free with 10mM L-Lysine -0.4 -0.4 -0.8 -0.3 +0.3
nitrogen source H2 N-free with 10mM Putrescine -0.3 -0.5 -0.9 -0.1 +0.4
nitrogen source H2 N-free with 10mM Thymidine -0.3 -0.7 -0.8 +0.0 +0.4
nitrogen source H2 N-free with 10mM L-Leucine -0.3 -0.4 -0.9 -0.2 +0.5
nitrogen source H2 N-free with 10mM NAG +0.2 -0.9 -0.7 -0.2 +0.4
nitrogen source H2 N-free with 10mM Thymidine -0.3 -0.5 -0.7 +0.6 +0.1
stress McCas_H2_complete sulfate 125 mM -0.7 +0.3 -0.6 -0.2 +0.6
stress McCas_H2_complete Irgasan 0.025 mM -0.0 +1.0 -0.4 +0.1 -0.6
stress McCas_formate_complete Spiramycin 0.1 mM +0.4 +0.6 -0.1 +0.4 -1.2
stress McCas_formate_complete 2-bromoethanesulfonic 0.00833333333333333 mM +0.2 -1.2 -0.0 +0.8 +0.6
stress McCas_H2_complete sodium nitrite 1.04166666666667 mM -0.1 +1.6 -0.5 +0.0 -0.5
stress McCas_H2_complete Sulfaquinoxaline 0.1 mM -0.5 +0.4 -0.3 +0.7 +0.4
stress McCas_H2_complete phosphate monobasic 83.3333333333333 mM -0.6 +0.6 -0.1 +0.3 +0.7
stress McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM -0.2 +1.4 -0.4 +0.1 +0.1
stress McCas_H2_complete Chloride 250 mM +0.0 +1.7 -0.2 -0.3 -0.0
stress McCas_H2_complete Chloride 250 mM -0.3 +1.6 -0.2 -0.2 +0.3
natural competence H2 McCas- cells grown in liquid medium with neomycin -0.1 -0.4 +1.1 +0.4 +0.2
stress Formate 100 mM hypophosphite +0.0 +0.9 +0.0 +0.7 -0.4
natural competence H2 McCas- cells incubated with 5000 ng DNA (pDNA pLW40neo) then transferred and grown in liquid medium with neomycin +0.1 -0.0 +2.1 +0.1 -0.5
no stress control McCas_H2_complete no stress control -0.1 +1.0 +0.0 +0.6 +0.6
stress McCas_H2_complete metronidazole 0.000833333333333333 -0.3 +1.8 -0.2 +0.3 +0.7
natural competence H2 McCas- cells grown in liquid medium with neomycin +0.1 +0.1 +2.3 +0.4 +0.0
natural competence H2 McCas- cells grown in liquid medium with neomycin +0.2 -0.3 +2.4 +0.9 +0.4
stress Formate with Neomycin 12.5 mM +0.3 -0.1 +2.7 +0.7 +0.0
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