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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS05025 and MMP_RS05030 are separated by 21 nucleotides
MMP_RS05030 and MMP_RS05035 are separated by 49 nucleotides
MMP_RS05035 and MMP_RS05040 are separated by 77 nucleotides
MMP_RS05040 and MMP_RS05045 overlap by 14 nucleotides
MMP_RS05025: MMP_RS05025 - ATP-dependent DNA ligase, at 956,353 to 958,074
_RS05025
MMP_RS05030: MMP_RS05030 - adenylosuccinate lyase, at 958,096 to 959,445
_RS05030
MMP_RS05035: MMP_RS05035 - hypothetical protein, at 959,495 to 959,908
_RS05035
MMP_RS05040: MMP_RS05040 - permease, at 959,986 to 960,843
_RS05040
MMP_RS05045: MMP_RS05045 - 4Fe-4S binding protein, at 960,830 to 961,489
_RS05045
Group
Condition
MMP
_RS05025
MMP
_RS05030
MMP
_RS05035
MMP
_RS05040
MMP
_RS05045
stress
McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM
N.D.
N.D.
-0.4
-0.4
-0.3
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
N.D.
N.D.
-0.6
-0.5
-0.0
stress
McCas_H2_complete metronidazole 0.000833333333333333
N.D.
N.D.
-0.8
-0.1
-0.0
stress
McCas_H2_complete Chlorpromazine 0.0333333333333333 mM
N.D.
N.D.
-0.4
-0.3
-0.3
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
-0.6
-0.1
-0.2
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
N.D.
N.D.
-0.5
-0.3
-0.1
stress
McCas_H2_complete Calcium Chloride Dihydrate 83.3333333333333 mM
N.D.
N.D.
-0.6
-0.2
-0.1
stress
H2 McCas with 40 minute oxygen exposure
N.D.
N.D.
-0.6
-0.1
-0.0
stress
H2 McCas with 1 mM polysulfide
N.D.
N.D.
-0.6
-0.1
-0.1
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
N.D.
N.D.
-0.3
-0.2
-0.3
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
N.D.
N.D.
-0.7
-0.0
+0.0
stress
McCas_H2_complete sodium bromide 250 mM
N.D.
N.D.
-0.7
+0.2
-0.0
stress
McCas_H2_complete sulfate 125 mM
N.D.
N.D.
-0.7
+0.1
+0.2
stress
McCas_formate_complete Chloride 250 mM
N.D.
N.D.
-0.6
+0.1
+0.1
nutrient t2
H2 deepwell acetate and casamino FREE
N.D.
N.D.
+0.4
-0.3
+0.1
no stress control
McCas_formate_complete no stress control
N.D.
N.D.
+0.5
-0.2
-0.1
nutrient t2
H2 deepwell casamino FREE
N.D.
N.D.
+0.6
-0.3
-0.0
nitrogen source
H2 N-free with 10mM Gly-D-Asp
N.D.
N.D.
+0.6
-0.2
+0.0
stress
McCas_H2_complete Irgasan 0.025 mM
N.D.
N.D.
+0.4
-0.2
+0.2
nutrient t2
H2 deepwell acetate and casamino FREE
N.D.
N.D.
+0.6
-0.2
+0.1
nitrogen source
H2 N-free with 10mM B-Alanine
N.D.
N.D.
+0.7
-0.1
+0.2
stress
McCas_formate_complete nitrate 35.7142857142857 mM
N.D.
N.D.
+0.6
+0.3
-0.1
stress
McCas_formate_complete sulfate 125 mM
N.D.
N.D.
+0.3
+0.2
+0.3
nitrogen source
H2 N-free with 10mM L-Serine
N.D.
N.D.
+0.8
+0.0
-0.0
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
N.D.
N.D.
+0.5
+0.0
+0.2
stress
McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM
N.D.
N.D.
+0.4
+0.3
+0.2
nitrogen source
H2 N-free with 10mM B-Alanine
N.D.
N.D.
+0.9
-0.0
+0.0
nitrogen source
H2 N-free with 5mM Inosine
N.D.
N.D.
+0.6
+0.2
+0.1
nitrogen source
H2 N-free with 2mM Adenosine
N.D.
N.D.
+0.2
+0.4
+0.4
stress
McCas_H2_complete sodium iodide 250 mM
N.D.
N.D.
+0.3
+0.5
+0.4
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