Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS05020 and MMP_RS05025 are separated by 28 nucleotidesMMP_RS05025 and MMP_RS05030 are separated by 21 nucleotidesMMP_RS05030 and MMP_RS05035 are separated by 49 nucleotidesMMP_RS05035 and MMP_RS05040 are separated by 77 nucleotides MMP_RS05020: MMP_RS05020 - hypothetical protein, at 955,908 to 956,324 _RS05020 MMP_RS05025: MMP_RS05025 - ATP-dependent DNA ligase, at 956,353 to 958,074 _RS05025 MMP_RS05030: MMP_RS05030 - adenylosuccinate lyase, at 958,096 to 959,445 _RS05030 MMP_RS05035: MMP_RS05035 - hypothetical protein, at 959,495 to 959,908 _RS05035 MMP_RS05040: MMP_RS05040 - permease, at 959,986 to 960,843 _RS05040
Group Condition MMP_RS05020 MMP_RS05025 MMP_RS05030 MMP_RS05035 MMP_RS05040
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -2.9 N.D. N.D. -0.0 -0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -2.8 N.D. N.D. +0.1 -0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -2.8 N.D. N.D. +0.2 -0.0
nitrogen source H2 N-free with 10mM Thymidine -2.3 N.D. N.D. -0.1 -0.2
nitrogen source H2 N-free with 10mM L-Arginine -2.2 N.D. N.D. -0.3 -0.1
nitrogen source H2 N-free with 10mM L-Lysine -2.1 N.D. N.D. -0.1 -0.4
nitrogen source H2 N-free with 10mM L-Arginine -2.0 N.D. N.D. -0.1 -0.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -2.6 N.D. N.D. +0.2 +0.0
nitrogen source H2 N-free with 10mM L-Valine -2.0 N.D. N.D. -0.3 -0.1
nitrogen source H2 N-free with 10mM Cytidine -2.0 N.D. N.D. -0.3 -0.1
nitrogen source H2 N-free with 10mM L-Leucine -2.2 N.D. N.D. +0.2 -0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -2.1 N.D. N.D. -0.1 -0.1
nitrogen source H2 N-free with 10mM Thymidine -2.1 N.D. N.D. -0.0 -0.1
nitrogen source H2 N-free with 10mM L-Phenylalanine -2.2 N.D. N.D. +0.2 -0.2
nitrogen source H2 N-free with 10mM NAG -1.8 N.D. N.D. +0.1 -0.4
nitrogen source H2 N-free with 10mM L-Citrulline -2.0 N.D. N.D. -0.1 -0.1
nitrogen source H2 N-free with 10mM L-Alanine -1.6 N.D. N.D. -0.6 +0.1
nitrogen source H2 N-free with 10mM L-Leucine -2.1 N.D. N.D. +0.1 -0.2
nitrogen source H2 N-free with 10mM L-Methionine -1.8 N.D. N.D. -0.3 +0.0
nitrogen source H2 N-free with 2mM Thymine -1.9 N.D. N.D. -0.2 -0.0
nitrogen source H2 N-free with 10mM L-Methionine -1.6 N.D. N.D. -0.4 -0.1
nitrogen source H2 N-free with 10mM L-Valine -1.7 N.D. N.D. +0.0 -0.3
nitrogen source H2 N-free with 5mM Inosine -2.1 N.D. N.D. +0.3 -0.2
nitrogen source H2 N-free with 10mM L-Methionine -1.9 N.D. N.D. +0.2 -0.2
stress McCas_formate_complete Spiramycin 0.1 mM -1.7 N.D. N.D. -0.2 +0.2
nitrogen source H2 N-free with 2.5mM Cytosine -1.7 N.D. N.D. +0.2 -0.2
no stress control McCas_formate_complete no stress control -1.8 N.D. N.D. +0.5 -0.2
stress McCas_formate_complete sulfate 125 mM -1.7 N.D. N.D. +0.3 +0.2
nitrogen source H2 N-free with 10mM L-Glutamic -1.6 N.D. N.D. +0.3 +0.1
nitrogen source H2 N-free with 5mM Inosine -1.6 N.D. N.D. +0.6 +0.2
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