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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS05010 and MMP_RS05015 are separated by 18 nucleotides
MMP_RS05015 and MMP_RS05020 are separated by 33 nucleotides
MMP_RS05020 and MMP_RS05025 are separated by 28 nucleotides
MMP_RS05025 and MMP_RS05030 are separated by 21 nucleotides
MMP_RS05010: MMP_RS05010 - KEOPS complex subunit Cgi121, at 954,150 to 954,581
_RS05010
MMP_RS05015: MMP_RS05015 - histidinol dehydrogenase, at 954,600 to 955,874
_RS05015
MMP_RS05020: MMP_RS05020 - hypothetical protein, at 955,908 to 956,324
_RS05020
MMP_RS05025: MMP_RS05025 - ATP-dependent DNA ligase, at 956,353 to 958,074
_RS05025
MMP_RS05030: MMP_RS05030 - adenylosuccinate lyase, at 958,096 to 959,445
_RS05030
Group
Condition
MMP
_RS05010
MMP
_RS05015
MMP
_RS05020
MMP
_RS05025
MMP
_RS05030
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations
N.D.
N.D.
-2.9
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations
N.D.
N.D.
-2.8
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
N.D.
N.D.
-2.8
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations
N.D.
N.D.
-2.6
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Thymidine
N.D.
N.D.
-2.3
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Phenylalanine
N.D.
N.D.
-2.2
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Leucine
N.D.
N.D.
-2.2
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Arginine
N.D.
N.D.
-2.2
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Thymidine
N.D.
N.D.
-2.1
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations
N.D.
N.D.
-2.1
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Lysine
N.D.
N.D.
-2.1
N.D.
N.D.
nitrogen source
H2 N-free with 5mM Inosine
N.D.
N.D.
-2.1
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Leucine
N.D.
N.D.
-2.1
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Arginine
N.D.
N.D.
-2.0
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Cytidine
N.D.
N.D.
-2.0
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Valine
N.D.
N.D.
-2.0
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Citrulline
N.D.
N.D.
-2.0
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Methionine
N.D.
N.D.
-1.9
N.D.
N.D.
nitrogen source
H2 N-free with 2mM Thymine
N.D.
N.D.
-1.9
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Methionine
N.D.
N.D.
-1.8
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Threonine
N.D.
N.D.
-1.8
N.D.
N.D.
nitrogen source
H2 N-free with 10mM NAG
N.D.
N.D.
-1.8
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Ornithine
N.D.
N.D.
-1.8
N.D.
N.D.
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
N.D.
N.D.
-1.8
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 10 generations
N.D.
N.D.
-1.8
N.D.
N.D.
no stress control
McCas_formate_complete no stress control
N.D.
N.D.
-1.8
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Glutamic
N.D.
N.D.
-1.8
N.D.
N.D.
nitrogen source
N2 fixation, H2 media
N.D.
N.D.
-1.7
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Aspartic Acid
N.D.
N.D.
-1.7
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Valine
N.D.
N.D.
-1.7
N.D.
N.D.
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