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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS05000 and MMP_RS05005 are separated by 86 nucleotides
MMP_RS05005 and MMP_RS05010 are separated by 256 nucleotides
MMP_RS05010 and MMP_RS05015 are separated by 18 nucleotides
MMP_RS05015 and MMP_RS05020 are separated by 33 nucleotides
MMP_RS05000: MMP_RS05000 - FmdE family protein, at 952,509 to 953,087
_RS05000
MMP_RS05005: MMP_RS05005 - uroporphyrinogen-III C-methyltransferase, at 953,174 to 953,893
_RS05005
MMP_RS05010: MMP_RS05010 - KEOPS complex subunit Cgi121, at 954,150 to 954,581
_RS05010
MMP_RS05015: MMP_RS05015 - histidinol dehydrogenase, at 954,600 to 955,874
_RS05015
MMP_RS05020: MMP_RS05020 - hypothetical protein, at 955,908 to 956,324
_RS05020
Group
Condition
MMP
_RS05000
MMP
_RS05005
MMP
_RS05010
MMP
_RS05015
MMP
_RS05020
nitrogen source
H2 N-free with 10mM L-Phenylalanine
-1.1
N.D.
N.D.
N.D.
-2.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations
-0.2
N.D.
N.D.
N.D.
-2.9
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-0.2
N.D.
N.D.
N.D.
-2.8
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations
-0.2
N.D.
N.D.
N.D.
-2.8
nitrogen source
H2 N-free with 10mM L-Leucine
-0.6
N.D.
N.D.
N.D.
-2.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations
-0.1
N.D.
N.D.
N.D.
-2.6
nitrogen source
H2 N-free with 10mM L-Leucine
-0.6
N.D.
N.D.
N.D.
-2.1
nitrogen source
H2 N-free with 10mM Cytidine
-0.7
N.D.
N.D.
N.D.
-2.0
nitrogen source
H2 N-free with 10mM L-Arginine
-0.5
N.D.
N.D.
N.D.
-2.2
nitrogen source
H2 N-free with 10mM Thymidine
-0.3
N.D.
N.D.
N.D.
-2.3
nitrogen source
N2 fixation, H2 media
-0.8
N.D.
N.D.
N.D.
-1.7
nitrogen source
H2 N-free with 10mM L-Methionine
-0.7
N.D.
N.D.
N.D.
-1.8
nitrogen source
H2 N-free with 10mM L-Methionine
-0.5
N.D.
N.D.
N.D.
-1.9
nitrogen source
H2 N-free with 10mM L-Arginine
-0.4
N.D.
N.D.
N.D.
-2.0
nitrogen source
H2 N-free with 10mM L-Citrulline
-0.5
N.D.
N.D.
N.D.
-2.0
nitrogen source
H2 N-free with 10mM L-Valine
-0.5
N.D.
N.D.
N.D.
-2.0
nitrogen source
H2 N-free with 10mM L-Valine
-0.6
N.D.
N.D.
N.D.
-1.7
nitrogen source
H2 N-free with 10mM L-Aspartic Acid
-0.6
N.D.
N.D.
N.D.
-1.7
nitrogen source
H2 N-free with 10mM L-Lysine
-0.2
N.D.
N.D.
N.D.
-2.1
nitrogen source
H2 N-free with 10mM Thymidine
-0.1
N.D.
N.D.
N.D.
-2.1
nitrogen source
H2 N-free with 10mM NAG
-0.5
N.D.
N.D.
N.D.
-1.8
nitrogen source
H2 N-free with 10mM L-Ornithine
-0.4
N.D.
N.D.
N.D.
-1.8
stress
McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
-0.8
N.D.
N.D.
N.D.
-1.4
nitrogen source
H2 N-free with 5mM Inosine
-0.1
N.D.
N.D.
N.D.
-2.1
nitrogen source
H2 N-free with 10mM L-Glutamic
-0.5
N.D.
N.D.
N.D.
-1.8
nitrogen source
H2 N-free with 2mM Thymine
-0.3
N.D.
N.D.
N.D.
-1.9
nitrogen source
H2 N-free with 10mM L-Threonine
-0.4
N.D.
N.D.
N.D.
-1.8
nitrogen source
H2 N-free with 10mM L-Glutamic
-0.5
N.D.
N.D.
N.D.
-1.6
nitrogen source
H2 N-free with 2mM Thymine
-0.5
N.D.
N.D.
N.D.
-1.7
nitrogen source
H2 N-free with 10mM L-Isoleucine
-0.5
N.D.
N.D.
N.D.
-1.6
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