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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS04945 and MMP_RS04950 are separated by 559 nucleotides
MMP_RS04950 and MMP_RS04955 are separated by 46 nucleotides
MMP_RS04955 and MMP_RS04960 are separated by 1 nucleotides
MMP_RS04960 and MMP_RS04965 are separated by 19 nucleotides
MMP_RS04945: MMP_RS04945 - hypothetical protein, at 941,822 to 942,295
_RS04945
MMP_RS04950: MMP_RS04950 - succinate--CoA ligase subunit alpha, at 942,855 to 943,718
_RS04950
MMP_RS04955: MMP_RS04955 - DNA topoisomerase I, at 943,765 to 946,236
_RS04955
MMP_RS04960: MMP_RS04960 - cytochrome c biogenesis CcdA family protein, at 946,238 to 946,891
_RS04960
MMP_RS04965: MMP_RS04965 - thioredoxin family protein, at 946,911 to 947,258
_RS04965
Group
Condition
MMP
_RS04945
MMP
_RS04950
MMP
_RS04955
MMP
_RS04960
MMP
_RS04965
nitrogen source
H2 N-free with 10mM L-Glutamic
+0.3
N.D.
-3.6
+0.1
-0.3
nitrogen source
H2 N-free with 10mM Cytidine
-0.5
N.D.
-2.7
-0.2
-0.0
rich t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE
-0.2
N.D.
-2.8
-0.1
-0.1
nitrogen source
H2 N-free with 5mM Inosine
-0.4
N.D.
-2.3
-0.1
-0.3
rich t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE
-0.3
N.D.
-2.6
-0.1
-0.1
stress
McCas_H2_complete sodium bromide 250 mM
-0.2
N.D.
-2.7
-0.2
+0.1
nitrogen source
H2 N-free with 10mM Cytidine
-0.4
N.D.
-2.1
+0.2
-0.3
nitrogen source
H2 N-free with 10mM L-Glutamic
+0.4
N.D.
-3.4
+0.4
-0.0
stress
McCas_H2_complete Lithium chloride 250 mM
+0.4
N.D.
-3.0
-0.1
+0.1
nutrient t2
H2 deepwell acetate and vitamin FREE
-0.9
N.D.
-2.1
+0.1
+0.3
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
+0.7
N.D.
-3.2
-0.0
+0.1
nitrogen source
H2 N-free with 10mM L-Proline
+0.3
N.D.
-2.7
+0.2
-0.1
stress
McCas_H2_complete metronidazole 0.00833333333333333 mM
-0.5
N.D.
-2.1
-0.2
+0.5
nitrogen source
H2 N-free with 10mM L-Citrulline
+0.4
N.D.
-2.7
+0.2
-0.1
nitrogen source
H2 N-free with 10mM L-Lysine
+0.2
N.D.
-2.6
+0.3
-0.0
stress
H2 McCas with 40 minute oxygen exposure
+0.1
N.D.
-2.6
+0.2
+0.2
nitrogen source
H2 N-free with 10mM L-Proline
+0.4
N.D.
-2.5
+0.3
-0.2
stress
H2 McCas with 40 minute oxygen exposure
+0.7
N.D.
-2.7
+0.1
-0.0
nitrogen source
H2 N-free with 10mM L-Citrulline
+0.5
N.D.
-2.6
+0.1
+0.0
nitrogen source
H2 N-free with 2.5mM Cytosine
+0.4
N.D.
-2.5
+0.3
-0.0
nitrogen source
H2 N-free with 10mM L-Lysine
+0.6
N.D.
-2.7
+0.3
+0.0
stress
H2 McCas with 40 minute oxygen exposure
+0.6
N.D.
-2.5
+0.3
+0.0
nutrient t2
H2 deepwell acetate and vitamin FREE
+0.6
N.D.
-2.4
+0.2
+0.2
stress
McCas_H2_complete Rifampicin 0.5 mM
+0.7
N.D.
-2.4
+0.3
+0.2
stress
McCas_formate_complete Rifampicin 0.5 mM
+0.6
N.D.
-2.4
+0.3
+0.3
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
+1.2
N.D.
-2.0
-0.3
-0.1
nutrient t2
H2 deepwell acetate FREE
+1.3
N.D.
-1.9
-0.0
+0.6
nutrient t2
H2 deepwell acetate FREE
+1.1
N.D.
-1.7
+0.4
+0.3
nitrogen source
H2 N-free with 2g/L casaminos 10mM Ammonium chloride
+2.2
N.D.
-0.9
+0.1
+0.1
stress
Formate 100 mM hypophosphite
-0.4
N.D.
+2.3
+0.0
+0.4
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