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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS04925 and MMP_RS04930 are separated by 10 nucleotides
MMP_RS04930 and MMP_RS04935 are separated by 92 nucleotides
MMP_RS04935 and MMP_RS04940 are separated by 142 nucleotides
MMP_RS04940 and MMP_RS04945 are separated by 290 nucleotides
MMP_RS04925: MMP_RS04925 - DUF530 family protein, at 937,787 to 939,217
_RS04925
MMP_RS04930: MMP_RS04930 - adenosylcobinamide-phosphate synthase CbiB, at 939,228 to 940,148
_RS04930
MMP_RS04935: MMP_RS04935 - translation initiation factor IF-5A, at 940,241 to 940,636
_RS04935
MMP_RS04940: MMP_RS04940 - precorrin-3B C(17)-methyltransferase, at 940,779 to 941,531
_RS04940
MMP_RS04945: MMP_RS04945 - hypothetical protein, at 941,822 to 942,295
_RS04945
Group
Condition
MMP
_RS04925
MMP
_RS04930
MMP
_RS04935
MMP
_RS04940
MMP
_RS04945
stress
McCas_H2_complete Chlorate 250 mM
N.D.
N.D.
N.D.
N.D.
-0.9
nutrient t2
H2 deepwell acetate and vitamin FREE
N.D.
N.D.
N.D.
N.D.
-0.9
stress
H2 McCas with 10 mM (NH4)2S
N.D.
N.D.
N.D.
N.D.
-0.7
stress
McCas_H2_complete Thioridazine 0.1 mM
N.D.
N.D.
N.D.
N.D.
+0.6
stress
McCas_formate_complete NO 0.025 mM
N.D.
N.D.
N.D.
N.D.
+0.7
stress
McCas_formate_complete Rifampicin 0.5 mM
N.D.
N.D.
N.D.
N.D.
+0.7
nitrogen source
H2 N-free with 2g/L casaminos
N.D.
N.D.
N.D.
N.D.
+0.7
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
N.D.
N.D.
N.D.
N.D.
+0.7
nitrogen source
H2 N-free with 10mM L-Leucine
N.D.
N.D.
N.D.
N.D.
+0.7
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
N.D.
N.D.
N.D.
N.D.
+0.7
stress
H2 McCas with 40 minute oxygen exposure
N.D.
N.D.
N.D.
N.D.
+0.7
stress
McCas_H2_complete Rifampicin 0.5 mM
N.D.
N.D.
N.D.
N.D.
+0.7
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
N.D.
N.D.
N.D.
N.D.
+0.7
iron
control, 1x iron with casaminos and vitamins, H2 media
N.D.
N.D.
N.D.
N.D.
+0.8
iron
control, 1x iron with casaminos and vitamins, H2 media
N.D.
N.D.
N.D.
N.D.
+0.8
nitrogen source
H2 N-free with 2g/L casaminos
N.D.
N.D.
N.D.
N.D.
+0.8
nitrogen source
H2 N-free with 2g/L casaminos 10mM Ammonium chloride
N.D.
N.D.
N.D.
N.D.
+0.8
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
N.D.
N.D.
N.D.
N.D.
+0.9
stress
McCas_H2_complete sodium nitrite 1.04166666666667 mM
N.D.
N.D.
N.D.
N.D.
+0.9
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
N.D.
N.D.
N.D.
N.D.
+1.0
stress
McCas_H2_complete Chloride 250 mM
N.D.
N.D.
N.D.
N.D.
+1.0
nitrogen source
H2 N-free with 2g/L casaminos
N.D.
N.D.
N.D.
N.D.
+1.1
stress
McCas_H2_complete Nitrofurantoin 0.1 mM
N.D.
N.D.
N.D.
N.D.
+1.1
stress
McCas_H2_complete sulfate 125 mM
N.D.
N.D.
N.D.
N.D.
+1.1
nutrient t2
H2 deepwell acetate FREE
N.D.
N.D.
N.D.
N.D.
+1.1
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
N.D.
N.D.
N.D.
N.D.
+1.2
stress
McCas_formate_complete Chloride 250 mM
N.D.
N.D.
N.D.
N.D.
+1.3
nutrient t2
H2 deepwell acetate FREE
N.D.
N.D.
N.D.
N.D.
+1.3
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
N.D.
N.D.
N.D.
N.D.
+1.4
nitrogen source
H2 N-free with 2g/L casaminos 10mM Ammonium chloride
N.D.
N.D.
N.D.
N.D.
+2.2
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