Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS04870 and MMP_RS04875 are separated by 22 nucleotidesMMP_RS04875 and MMP_RS04880 are separated by 64 nucleotidesMMP_RS04880 and MMP_RS04885 are separated by 57 nucleotidesMMP_RS04885 and MMP_RS04890 are separated by 13 nucleotides MMP_RS04870: MMP_RS04870 - TIGR02253 family HAD-type hydrolase, at 926,379 to 927,056 _RS04870 MMP_RS04875: MMP_RS04875 - energy-converting hydrogenase B subunit P, at 927,079 to 927,366 _RS04875 MMP_RS04880: MMP_RS04880 - phosphoadenosine phosphosulfate reductase family protein, at 927,431 to 928,942 _RS04880 MMP_RS04885: MMP_RS04885 - sulfite exporter TauE/SafE family protein, at 929,000 to 929,812 _RS04885 MMP_RS04890: MMP_RS04890 - adenylyltransferase/cytidyltransferase family protein, at 929,826 to 930,278 _RS04890
Group Condition MMP_RS04870 MMP_RS04875 MMP_RS04880 MMP_RS04885 MMP_RS04890
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -8.1 -8.4 +0.3 -1.4 -3.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -8.6 -7.3 +0.3 -1.2 -4.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -4.8 -8.9 +0.0 -1.1 -4.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -6.4 -4.0 +0.1 -2.3 -4.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -6.3 -4.8 -0.1 -0.7 -4.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -6.0 -4.1 +0.0 -1.4 -4.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -5.8 -4.1 +0.0 -1.2 -4.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations -6.6 -2.9 +0.2 -0.3 -4.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -4.5 -3.0 +0.0 -2.0 -4.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -5.0 -2.6 +0.1 -1.5 -4.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations -5.9 -3.0 +0.1 +0.0 -4.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 10 generations -4.2 -2.9 +0.1 -0.5 -4.4
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -3.3 -3.2 +0.0 -0.7 -4.0
stress McCas_formate_complete sodium nitrite 0.25 mM -4.7 -2.1 -0.2 +0.2 -3.9
stress McCas_formate_complete NO 0.025 mM -5.1 -1.4 -0.1 -0.1 -4.0
nutrient t1 Mc formate, casamino free, with 10mM L-Methionine -3.5 -2.7 -0.5 -0.5 -2.6
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -4.0 -1.8 +0.3 +0.1 -4.0
nitrogen source H2 N-free with 10mM L-Arginine -2.6 -1.4 -0.1 +1.4 -4.4
nitrogen source H2 N-free with 10mM L-Lysine -2.7 -1.2 -0.1 +1.3 -4.3
nitrogen source H2 N-free with 10mM L-Methionine -3.5 -2.0 -0.0 +1.5 -2.8
nitrogen source H2 N-free with 10mM Glycine -2.7 -2.2 -0.1 +1.5 -3.1
nitrogen source H2 N-free with 10mM L-Proline -2.2 -1.4 -0.2 +1.7 -4.2
nitrogen source H2 N-free with 10mM L-Citrulline -2.0 -1.5 -0.0 +1.7 -4.4
nitrogen source H2 N-free with 10mM L-Aspartic Acid -2.6 -1.9 -0.1 +1.8 -3.4
nitrogen source H2 N-free with 10mM L-Arginine -2.8 -1.9 -0.2 +2.7 -2.9
nitrogen source H2 N-free with 10mM L-Glutamic -1.9 -1.3 -0.1 +2.5 -4.3
nitrogen source H2 N-free with 10mM Cytidine -2.3 -1.0 -0.4 +2.3 -3.6
nitrogen source H2 N-free with 5mM Inosine -1.6 -0.1 +0.2 +4.4 -3.5
stress McCas_H2_complete sodium nitrite 1.04166666666667 mM +2.0 +4.1 +0.2 +0.0 -4.0
stress McCas_H2_complete Spiramycin 0.1 mM +1.9 +4.8 -0.2 +0.4 -2.6
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