Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS04670 and MMP_RS04675 are separated by 9 nucleotidesMMP_RS04675 and MMP_RS04680 are separated by 29 nucleotidesMMP_RS04680 and MMP_RS04685 are separated by 66 nucleotidesMMP_RS04685 and MMP_RS04690 are separated by 11 nucleotides MMP_RS04670: MMP_RS04670 - selenouridine synthase SelU-like subunit, at 894,927 to 895,586 _RS04670 MMP_RS04675: MMP_RS04675 - selenouridine synthase SelU-like subunit, at 895,596 to 896,249 _RS04675 MMP_RS04680: MMP_RS04680 - NOG1 family protein, at 896,279 to 897,316 _RS04680 MMP_RS04685: MMP_RS04685 - DUF126 domain-containing protein, at 897,383 to 897,775 _RS04685 MMP_RS04690: MMP_RS04690 - class III signal peptide-containing protein, at 897,787 to 898,014 _RS04690
Group Condition MMP_RS04670 MMP_RS04675 MMP_RS04680 MMP_RS04685 MMP_RS04690
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -0.3 -0.3 N.D. -7.8 -1.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -0.3 -0.1 N.D. -7.5 -1.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -0.3 -0.3 N.D. -7.6 -1.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -0.3 -0.3 N.D. -7.5 -1.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -0.3 -0.4 N.D. -7.4 -1.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -0.1 +0.1 N.D. -6.5 -2.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -0.3 -0.3 N.D. -7.4 -0.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations -0.2 -0.1 N.D. -7.3 -1.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -0.0 -0.5 N.D. -7.0 -1.0
rich t2 Formate McCas deepwell complete -0.4 -0.3 N.D. -6.9 -0.8
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -0.2 -0.4 N.D. -6.2 -0.8
stress McCas_formate_complete Rifampicin 0.5 mM -0.5 -0.5 N.D. -5.7 -0.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +0.2 -0.1 N.D. -6.9 -0.9
nutrient t2 H2 deepwell acetate and vitamin FREE -0.1 -0.4 N.D. -6.6 -0.5
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -0.2 -0.3 N.D. -6.4 -0.7
nutrient t2 H2 deepwell acetate and vitamin FREE -0.2 -0.1 N.D. -6.6 -0.6
nutrient t2 H2 deepwell vitamin and casamino FREE -0.1 -0.0 N.D. -6.3 -1.0
nutrient t2 H2 deepwell casamino FREE +0.0 +0.1 N.D. -6.6 -0.8
nutrient t2 H2 deepwell casamino FREE -0.4 -0.1 N.D. -6.0 -0.7
stress McCas_H2_complete Hydroxylamine 2.08333333333333 mM -0.2 -0.2 N.D. -5.7 -1.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -0.2 -0.3 N.D. -6.0 -0.6
nutrient t2 H2 deepwell acetate FREE -0.4 +0.1 N.D. -5.7 -1.1
nutrient t2 H2 deepwell vitamin FREE -0.1 +0.2 N.D. -6.3 -0.9
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -0.2 -0.3 N.D. -6.1 -0.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 10 generations -0.1 -0.1 N.D. -6.2 -0.4
nutrient t2 H2 deepwell casamino FREE -0.0 -0.3 N.D. -5.7 -0.8
nutrient t2 H2 deepwell vitamin and casamino FREE -0.1 +0.1 N.D. -6.4 -0.4
nutrient t2 H2 deepwell vitamin and casamino FREE -0.1 +0.1 N.D. -6.2 -0.7
rich t2 H2 McCas deepwell complete +0.5 +0.2 N.D. -5.7 -1.3
nutrient t2 H2 deepwell autotrophic conditions +0.1 +0.2 N.D. -6.0 -0.3
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