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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS04660 and MMP_RS04665 are separated by 92 nucleotides
MMP_RS04665 and MMP_RS04670 are separated by 301 nucleotides
MMP_RS04670 and MMP_RS04675 are separated by 9 nucleotides
MMP_RS04675 and MMP_RS04680 are separated by 29 nucleotides
MMP_RS04660: MMP_RS04660 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase, at 890,226 to 891,452
_RS04660
MMP_RS04665: MMP_RS04665 - SBBP repeat-containing protein, at 891,545 to 894,625
_RS04665
MMP_RS04670: MMP_RS04670 - selenouridine synthase SelU-like subunit, at 894,927 to 895,586
_RS04670
MMP_RS04675: MMP_RS04675 - selenouridine synthase SelU-like subunit, at 895,596 to 896,249
_RS04675
MMP_RS04680: MMP_RS04680 - NOG1 family protein, at 896,279 to 897,316
_RS04680
Group
Condition
MMP
_RS04660
MMP
_RS04665
MMP
_RS04670
MMP
_RS04675
MMP
_RS04680
stress
Formate 100 mM hypophosphite
N.D.
-0.1
-1.2
-1.1
N.D.
stress
Formate 100 mM hypophosphite
N.D.
-0.1
-1.0
-0.9
N.D.
stress
McCas_formate_complete Fluorophosphate 62.5 mM
N.D.
-0.0
-0.8
-0.8
N.D.
stress
McCas_formate_complete arsenate 0.416666666666667 mM
N.D.
+0.0
-0.3
-1.2
N.D.
stress
McCas_formate_complete sulfate 125 mM
N.D.
+0.1
-0.7
-0.8
N.D.
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
N.D.
+0.1
-0.8
-0.6
N.D.
no stress control
McCas_formate_complete no stress control
N.D.
+0.0
-0.8
-0.6
N.D.
stress
McCas_formate_complete Magnesium chloride 250 mM
N.D.
+0.1
-0.7
-0.7
N.D.
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
N.D.
+0.0
-0.7
-0.7
N.D.
nutrient t2
Formate deepwell autotrophic conditions
N.D.
+0.0
-0.7
-0.6
N.D.
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
N.D.
+0.1
-0.6
-0.8
N.D.
nutrient t2
Formate deepwell vitamin and casamino FREE
N.D.
-0.0
-0.6
-0.6
N.D.
nutrient t1
Formate deepwell casamino FREE
N.D.
-0.0
-0.6
-0.6
N.D.
stress
Formate 100 mM hypophosphite
N.D.
-0.1
-0.6
-0.5
N.D.
stress
McCas_formate_complete arsenate 0.416666666666667 mM
N.D.
-0.0
-0.5
-0.6
N.D.
nutrient t1
Formate deepwell casamino FREE
N.D.
-0.0
-0.5
-0.6
N.D.
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
N.D.
-0.0
-0.5
-0.6
N.D.
stress
McCas_formate_complete hypophosphite 125 mM
N.D.
-0.0
-0.5
-0.6
N.D.
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
N.D.
+0.1
-0.7
-0.6
N.D.
nutrient t2
Formate deepwell vitamin and casamino FREE
N.D.
-0.1
-0.6
-0.5
N.D.
stress
H2 50 mM hypophosphite
N.D.
+0.0
-0.6
-0.5
N.D.
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
N.D.
+0.2
-0.6
-0.7
N.D.
stress
McCas_formate_complete Anhydrotetracycline 0.05 mM
N.D.
+0.0
-0.4
-0.7
N.D.
nutrient t2
Formate deepwell autotrophic conditions
N.D.
+0.0
-0.5
-0.6
N.D.
stress
McCas_formate_complete Polymyxin B sulfate 0.1 mM
N.D.
+0.1
-0.5
-0.7
N.D.
stress
McCas_formate_complete 3-nitroxypropanol 0.00833333333333333 mM
N.D.
+0.1
-0.5
-0.6
N.D.
nitrogen source
H2 N-free with 10mM L-Threonine
N.D.
+0.1
-0.4
-0.6
N.D.
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
N.D.
+0.1
-0.6
-0.4
N.D.
nitrogen source
H2 N-free with 5mM Inosine
N.D.
+0.2
-0.6
-0.4
N.D.
stress
McCas_H2_complete sodium iodide 250 mM
N.D.
-0.0
+0.4
+0.9
N.D.
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