Fitness for 5 genes in Methanococcus maripaludis S2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 700 experiments or choose conditions or try the comparative fitness browser

500 ntMMP_RS04615 and MMP_RS04620 overlap by 8 nucleotidesMMP_RS04620 and MMP_RS04625 are separated by 197 nucleotidesMMP_RS04625 and MMP_RS04630 are separated by 213 nucleotidesMMP_RS04630 and MMP_RS04635 are separated by 23 nucleotides MMP_RS04615: MMP_RS04615 - PDGLE domain-containing protein, at 880,636 to 880,962 _RS04615 MMP_RS04620: MMP_RS04620 - cobalt transporter CbiM, at 880,955 to 881,593 _RS04620 MMP_RS04625: MMP_RS04625 - DEAD/DEAH box helicase, at 881,791 to 884,034 _RS04625 MMP_RS04630: MMP_RS04630 - 3'-5' exonuclease, at 884,248 to 884,823 _RS04630 MMP_RS04635: MMP_RS04635 - GNAT family N-acetyltransferase, at 884,847 to 885,395 _RS04635
Group Condition MMP_RS04615 MMP_RS04620 MMP_RS04625 MMP_RS04630 MMP_RS04635
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -10.5 -7.9 -0.4 -0.4 -0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -10.5 -7.7 -0.6 -0.3 -0.2
nutrient t2 Formate deepwell autotrophic conditions -10.1 -8.5 +0.2 -0.1 +0.2
nutrient t2 Formate deepwell autotrophic conditions -9.9 -8.4 +0.3 -0.0 -0.1
nutrient t2 Formate deepwell acetate and casamino FREE -10.4 -7.8 +0.3 -0.1 +0.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -8.8 -7.8 -0.6 -0.2 -0.1
nutrient t2 H2 deepwell vitamin and casamino FREE -9.4 -6.3 -0.2 -0.5 -0.1
nutrient t2 Formate deepwell autotrophic conditions -8.4 -8.3 +0.2 -0.1 +0.1
nutrient t2 Formate deepwell vitamin and casamino FREE -9.7 -6.0 -0.1 -0.0 -0.2
nutrient t2 Formate deepwell acetate and casamino FREE -7.4 -8.8 +0.4 -0.1 +0.1
nutrient t2 Formate deepwell acetate and casamino FREE -7.4 -8.2 +0.2 -0.4 +0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -9.2 -6.0 -0.2 -0.3 +0.0
nutrient t2 H2 deepwell acetate and casamino FREE -6.8 -6.9 -0.3 +0.1 -0.9
nutrient t2 H2 deepwell acetate and vitamin FREE -8.1 -6.2 +0.2 +0.1 -0.3
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -7.3 -6.5 -0.2 -0.0 -0.2
nutrient t2 H2 deepwell casamino FREE -8.3 -5.6 -0.1 -0.1 +0.0
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -7.4 -6.4 -0.1 +0.1 +0.1
nutrient t2 H2 deepwell autotrophic conditions -7.0 -6.3 -0.0 -0.1 -0.3
nutrient t2 H2 deepwell vitamin and casamino FREE -7.4 -5.9 -0.1 -0.2 -0.1
nutrient t2 H2 deepwell casamino FREE -5.5 -7.2 -0.2 -0.3 -0.3
nutrient t2 H2 deepwell acetate and casamino FREE -6.5 -6.0 -0.2 -0.5 -0.3
nutrient t2 H2 deepwell casamino FREE -7.5 -5.9 -0.3 +0.1 +0.1
nutrient t2 H2 deepwell acetate and casamino FREE -6.7 -5.9 -0.3 -0.0 -0.2
nutrient t2 H2 deepwell vitamin and casamino FREE -4.9 -6.6 -0.5 -0.6 +0.0
nutrient t2 Formate deepwell acetate FREE -6.4 -5.0 -0.3 -0.4 -0.5
nutrient t2 H2 deepwell autotrophic conditions -5.9 -5.9 -0.1 -0.3 -0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -5.7 -6.1 -0.6 -0.1 +0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -7.3 -4.0 -0.7 -0.2 -0.1
nutrient t2 H2 deepwell acetate and casamino FREE -4.9 -6.7 -0.4 -0.1 -0.2
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -6.0 -5.5 -0.4 -0.5 +0.2
remove
MMP_RS04615
plot
remove
MMP_RS04620
plot
remove
MMP_RS04625
remove
MMP_RS04630
plot
remove
MMP_RS04635
plot