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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS04520 and MMP_RS04525 are separated by 31 nucleotides
MMP_RS04525 and MMP_RS04530 are separated by 41 nucleotides
MMP_RS04530 and MMP_RS04535 are separated by 120 nucleotides
MMP_RS04535 and MMP_RS04540 are separated by 89 nucleotides
MMP_RS04520: MMP_RS04520 - nucleoside deaminase, at 861,159 to 861,596
_RS04520
MMP_RS04525: MMP_RS04525 - D-2-hydroxyacid dehydrogenase, at 861,628 to 862,584
_RS04525
MMP_RS04530: MMP_RS04530 - ABC transporter permease, at 862,626 to 863,819
_RS04530
MMP_RS04535: MMP_RS04535 - hydroxymethylbilane synthase, at 863,940 to 864,854
_RS04535
MMP_RS04540: MMP_RS04540 - tetratricopeptide repeat protein, at 864,944 to 866,647
_RS04540
Group
Condition
MMP
_RS04520
MMP
_RS04525
MMP
_RS04530
MMP
_RS04535
MMP
_RS04540
stress
McCas_H2_complete selenate 62.5 mM
-0.9
-0.2
-0.1
N.D.
-0.3
stress
McCas_formate_complete Irgasan 0.025 mM
-0.5
-0.2
-0.5
N.D.
-0.3
nitrogen source
H2 N-free with 10mM Uridine
-1.0
-0.0
-0.2
N.D.
-0.1
stress
McCas_formate_complete Novobiocin 0.025 mM
-0.5
-0.0
-0.7
N.D.
-0.1
stress
McCas_formate_complete Rifampicin 0.5 mM
-0.5
+0.0
-0.4
N.D.
-0.4
stress
McCas_formate_complete Fluorophosphate 62.5 mM
+0.4
-0.1
-0.8
N.D.
-0.3
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
-1.1
+0.0
+0.3
N.D.
+0.1
stress
McCas_H2_complete molybdate 45.4545454545455 mM
-0.7
-0.1
+0.4
N.D.
-0.2
nitrogen source
H2 N-free with 10mM L-Proline
-0.8
-0.1
+0.4
N.D.
+0.0
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
-0.4
-0.0
+0.5
N.D.
-0.4
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
+0.4
-0.4
+0.2
N.D.
-0.3
stress
McCas_H2_complete metronidazole 0.000833333333333333
+0.6
-0.1
+0.2
N.D.
-0.4
nutrient t2
H2 deepwell acetate and vitamin FREE
+0.8
-0.2
-0.3
N.D.
-0.1
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
+0.5
-0.2
+0.3
N.D.
-0.3
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
+0.9
-0.1
-0.3
N.D.
+0.0
stress
McCas_H2_complete silver chloride 0.5 mM
+0.6
-0.2
+0.3
N.D.
-0.2
no stress control
McCas_H2_complete no stress control
+0.8
-0.1
+0.2
N.D.
-0.3
natural competence
H2 McCas- cells grown in liquid medium with neomycin
+1.1
-0.2
-0.3
N.D.
+0.1
no stress control
McCas_H2_complete no stress control
+0.7
-0.0
+0.4
N.D.
-0.3
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
+0.4
-0.1
+0.8
N.D.
-0.3
stress
McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM
+1.0
-0.2
+0.3
N.D.
-0.2
iron
Iron excess (5x) , H2 media
+0.7
-0.2
+0.5
N.D.
-0.0
stress
McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM
+0.3
-0.1
+0.9
N.D.
-0.1
stress
McCas_formate_complete Chloride 500 mM
+0.7
+0.2
+0.4
N.D.
-0.2
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
+0.5
+0.1
+0.7
N.D.
-0.1
stress
McCas_H2_complete metavanadate 4.54545454545455 mM
+0.5
-0.1
+0.8
N.D.
+0.0
nutrient t2
H2 deepwell acetate and casamino FREE
+1.2
+0.1
+0.1
N.D.
+0.0
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
+1.0
-0.0
+0.3
N.D.
+0.1
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
+0.8
-0.1
+0.8
N.D.
-0.1
stress
McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM
+2.1
-0.2
-0.0
N.D.
-0.1
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