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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS04385 and MMP_RS04390 are separated by 90 nucleotides
MMP_RS04390 and MMP_RS04395 are separated by 63 nucleotides
MMP_RS04395 and MMP_RS04400 are separated by 42 nucleotides
MMP_RS04400 and MMP_RS04405 are separated by 257 nucleotides
MMP_RS04385: MMP_RS04385 - hypothetical protein, at 836,716 to 837,114
_RS04385
MMP_RS04390: MMP_RS04390 - hypothetical protein, at 837,205 to 837,441
_RS04390
MMP_RS04395: MMP_RS04395 - Bax inhibitor-1/YccA family protein, at 837,505 to 838,239
_RS04395
MMP_RS04400: MMP_RS04400 - hypothetical protein, at 838,282 to 838,638
_RS04400
MMP_RS04405: MMP_RS04405 - hypothetical protein, at 838,896 to 839,165
_RS04405
Group
Condition
MMP
_RS04385
MMP
_RS04390
MMP
_RS04395
MMP
_RS04400
MMP
_RS04405
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
-0.5
-0.5
-0.1
-0.3
-0.4
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-0.2
-0.0
-0.5
-0.6
-0.2
stress
McCas_formate_complete Cesium chloride 41.6666666666667 mM
-0.3
-0.2
-0.3
-0.4
-0.3
stress
McCas_H2_complete Chlorpromazine 0.0333333333333333 mM
-0.2
-0.7
-0.3
-0.0
-0.2
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
-0.1
-0.5
-0.5
-0.6
+0.2
stress
McCas_H2_complete metronidazole 0.000833333333333333
-0.1
-0.5
-0.5
-0.2
-0.1
stress
McCas_formate_complete Antimycin A 0.01 mM
-0.2
-0.2
-0.1
-0.5
-0.5
stress
McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM
-0.4
-0.4
-0.3
-0.3
+0.0
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
-0.3
-0.5
-0.2
-0.4
+0.1
nitrogen source
H2 N-free with 10mM L-tyrosine
-0.1
-0.2
-0.6
+0.1
-0.4
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
-0.3
-0.7
-0.0
-0.3
+0.1
nutrient t2
H2 deepwell acetate and casamino FREE
+0.1
+0.1
-0.5
-0.4
-0.5
nutrient t1
Mc formate, casamino free, with 10mM L-Ornithine
+0.1
-0.8
-0.4
+0.0
-0.1
stress
H2 McCas with 40 minute oxygen exposure
-0.1
-0.5
-0.2
-0.5
+0.2
nutrient t2
H2 deepwell acetate and vitamin FREE
-0.1
-0.4
-0.1
-0.7
+0.2
stress
McCas_H2_complete metronidazole 0.00833333333333333 mM
-0.5
-0.5
-0.3
-0.0
+0.4
stress
McCas_H2_complete Spiramycin 0.1 mM
-0.2
-0.4
-0.2
-0.8
+0.5
stress
McCas_H2_complete Rifampicin 0.5 mM
-0.1
-0.6
-0.4
-0.4
+0.6
nitrogen source
H2 N-free with 10mM L-Isoleucine
-0.1
-0.4
-0.3
-0.4
+0.3
no stress control
McCas_H2_complete no stress control
-0.2
-0.7
+0.3
-0.1
-0.2
nutrient t1
Mc formate, casamino free, with 10mM L-Ornithine
+0.1
-0.7
-0.3
+0.2
-0.2
stress
McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM
-0.0
-0.6
-0.2
-0.4
+0.3
no stress control
McCas_H2_complete no stress control
-0.2
-0.5
-0.0
-0.5
+0.5
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
-0.1
+0.5
-0.5
-0.4
+0.1
stress
McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM
-0.3
+0.0
-0.2
-0.4
+0.6
stress
McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM
-0.1
-0.4
-0.1
-0.3
+0.6
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
-0.2
-0.2
+0.2
-0.4
+0.4
stress
McCas_H2_complete Econazole nitrate salt 0.02 mM
-0.3
-0.1
+0.0
-0.4
+0.6
nitrogen source
H2 N-free with 10mM L-Serine
+0.2
+0.2
-0.2
+0.3
+1.0
stress
McCas_H2_complete Fluorophosphate 62.5 mM
+0.5
+0.2
+0.3
-0.0
+0.7
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