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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS04310 and MMP_RS04315 are separated by 268 nucleotides
MMP_RS04315 and MMP_RS04320 are separated by 24 nucleotides
MMP_RS04320 and MMP_RS04325 are separated by 123 nucleotides
MMP_RS04325 and MMP_RS04330 are separated by 0 nucleotides
MMP_RS04310: MMP_RS04310 - hypothetical protein, at 822,505 to 822,849
_RS04310
MMP_RS04315: MMP_RS04315 - corrinoid protein, at 823,118 to 823,777
_RS04315
MMP_RS04320: MMP_RS04320 - uroporphyrinogen decarboxylase family protein, at 823,802 to 824,893
_RS04320
MMP_RS04325: MMP_RS04325 - MtaA/CmuA family methyltransferase, at 825,017 to 826,045
_RS04325
MMP_RS04330: MMP_RS04330 - ASKHA domain-containing protein, at 826,046 to 827,824
_RS04330
Group
Condition
MMP
_RS04310
MMP
_RS04315
MMP
_RS04320
MMP
_RS04325
MMP
_RS04330
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-1.1
-0.3
-0.5
-0.6
+0.1
stress
McCas_H2_complete Irgasan 0.025 mM
-0.6
-0.4
-0.0
-0.8
-0.4
nutrient t2
H2 deepwell vitamin FREE
-0.6
-0.8
-0.3
-0.1
-0.2
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
-1.0
+0.2
-0.3
-0.5
-0.2
stress
McCas_H2_complete Bacitracin 0.003125 mM
-1.0
-0.2
-0.0
-0.4
-0.1
stress
McCas_H2_complete metronidazole 0.000833333333333333
-0.5
-0.1
-0.3
-0.1
-0.7
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
-0.8
+0.0
-0.1
-0.3
-0.5
stress
H2 50 mM hypophosphite
-0.1
-0.3
-0.4
-0.4
-0.4
stress
McCas_H2_complete 8-hydroxy-nitroquinolone 0.0166666666666667 mM
-0.8
+0.3
+0.1
-0.5
-0.4
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
-1.3
-0.1
+0.1
+0.1
-0.1
nutrient t2
H2 deepwell vitamin and casamino FREE
-0.7
-0.1
+0.1
-0.6
+0.2
nutrient t2
Formate deepwell acetate FREE
-0.4
-0.3
+0.3
-0.5
-0.1
stress
McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM
+0.4
+0.1
-0.4
-0.6
-0.3
stress
McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM
+0.5
-0.2
-0.3
-0.1
-0.6
nitrogen source
H2 N-free with 10mM L-Methionine
-0.8
+0.4
+0.1
-0.2
-0.2
stress
McCas_H2_complete sodium bromide 250 mM
-0.5
+0.5
-0.1
-0.4
-0.1
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
-0.6
+0.4
-0.3
+0.3
-0.3
nutrient t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
-0.4
-0.3
+0.3
-0.4
+0.3
stress
McCas_formate_complete nitrate 35.7142857142857 mM
+0.7
+0.1
-0.2
-0.1
-0.6
nitrogen source
H2 N-free with 5mM Inosine
-0.1
+0.4
+0.3
-0.8
+0.3
stress
McCas_formate_complete Antimycin A 0.01 mM
+1.0
-0.3
-0.0
+0.5
-0.4
stress
McCas_formate_complete gold (III) chloride 0.0714285714285714 mM
+0.8
-0.3
-0.2
+0.5
-0.1
nutrient t2
H2 deepwell acetate FREE
+0.4
+0.5
-0.1
+0.5
-0.3
stress
McCas_H2_complete Spiramycin 0.1 mM
+1.2
+0.2
+0.2
-0.3
-0.3
nitrogen source
Formate N-free with 2mM Adenosine
+0.6
+0.0
-0.5
+0.8
+0.2
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
+1.0
+0.7
-0.4
-0.1
-0.1
stress
McCas_formate_complete dimetridazole 0.00416666666666667 mM
+0.8
+0.2
-0.3
+0.3
+0.4
stress
McCas_H2_complete Fluorophosphate 62.5 mM
+0.9
+1.0
+0.1
-0.6
-0.1
nitrogen source
H2 N-free with 10mM L-tyrosine
+1.3
-0.0
-0.1
+0.4
-0.3
stress
McCas_formate_complete Chloride 250 mM
+2.0
+0.1
+0.1
+0.2
-0.1
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