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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS04260 and MMP_RS04265 are separated by 10 nucleotides
MMP_RS04265 and MMP_RS04270 are separated by 13 nucleotides
MMP_RS04270 and MMP_RS04275 are separated by 358 nucleotides
MMP_RS04275 and MMP_RS04280 are separated by 16 nucleotides
MMP_RS04260: MMP_RS04260 - coenzyme F420 hydrogenase subunit gamma, at 812,509 to 813,237
_RS04260
MMP_RS04265: MMP_RS04265 - coenzyme F420-reducing hydrogenase FrhD protein, at 813,248 to 813,748
_RS04265
MMP_RS04270: MMP_RS04270 - coenzyme F420 hydrogenase subunit alpha, at 813,762 to 814,994
_RS04270
MMP_RS04275: MMP_RS04275 - hydrogenase iron-sulfur subunit, at 815,353 to 815,775
_RS04275
MMP_RS04280: MMP_RS04280 - coenzyme F420-non-reducing hydrogenase subunit gamma, at 815,792 to 816,694
_RS04280
Group
Condition
MMP
_RS04260
MMP
_RS04265
MMP
_RS04270
MMP
_RS04275
MMP
_RS04280
stress
McCas_H2_complete gold (III) chloride 0.0357142857142857 mM
-0.6
-1.1
-0.5
-1.2
-1.5
stress
McCas_formate_complete gold (III) chloride 0.0714285714285714 mM
-0.9
-0.7
-0.5
-1.0
-1.6
stress
McCas_H2_complete gold (III) chloride 0.0357142857142857 mM
-0.4
-1.1
-0.7
-0.9
-1.1
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
-0.1
-1.0
+0.4
-1.1
-0.7
stress
McCas_H2_complete Irgasan 0.025 mM
-0.7
-0.8
-0.3
-0.1
-0.5
stress
McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM
-0.3
-0.9
-0.4
-0.3
-0.5
stress
McCas_H2_complete Fluorophosphate 62.5 mM
-0.4
-1.1
-0.3
-0.3
-0.1
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
-0.6
-0.2
-0.3
-0.3
-0.7
nutrient t2
H2 deepwell autotrophic conditions
+0.3
-1.1
-0.0
-0.6
-0.5
no stress control
McCas_H2_complete no stress control
+0.1
-0.9
+0.1
-0.5
-0.6
nitrogen source
H2 N-free with 10mM L-Glutamic
+0.1
-1.6
-0.0
-0.1
-0.2
nutrient t2
H2 deepwell acetate and casamino FREE
+0.3
-0.1
-0.2
-1.0
-0.8
stress
McCas_H2_complete Lithium chloride 250 mM
+0.1
-0.7
-0.2
-0.4
-0.6
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
-0.4
-0.5
-0.2
+0.1
-0.8
nitrogen source
H2 N-free with 5mM Inosine
-0.0
-1.9
+0.4
+0.0
-0.3
stress
McCas_formate_complete Cesium chloride 41.6666666666667 mM
-0.1
-1.5
+0.1
-0.2
+0.0
nutrient t2
H2 deepwell acetate and casamino FREE
+0.0
-0.9
+0.1
-0.6
-0.3
nitrogen source
H2 N-free with 10mM L-Valine
+0.2
-1.0
-0.3
-0.0
-0.5
no stress control
McCas_H2_complete no stress control
-0.2
+0.2
-0.7
-0.3
-0.5
no stress control
McCas_H2_complete no stress control
-0.5
+0.3
-0.4
-0.3
-0.5
stress
McCas_H2_complete metronidazole 0.00833333333333333 mM
-0.2
-1.1
+0.3
+0.1
-0.5
nutrient t2
H2 deepwell autotrophic conditions
+0.2
-0.2
+0.3
-0.8
-0.4
nitrogen source
H2 N-free with 2mM Thymine
+0.4
-1.3
-0.1
+0.1
-0.0
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
+0.2
+0.5
-0.4
-0.7
-0.3
no stress control
McCas_H2_complete no stress control
-0.3
+0.9
-0.1
-0.2
-0.8
no stress control
McCas_H2_complete no stress control
-0.1
+1.1
+0.2
-0.3
-0.6
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
+1.3
-0.1
+0.2
-0.2
-0.5
stress
McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM
-0.5
+0.7
+0.5
-0.1
+0.2
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
-0.0
+1.2
+0.2
+0.5
+0.1
stress
McCas_H2_complete sulfate 125 mM
+0.7
+2.5
-0.4
+0.4
-0.2
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