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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS04245 and MMP_RS04250 are separated by 325 nucleotides
MMP_RS04250 and MMP_RS04255 are separated by 152 nucleotides
MMP_RS04255 and MMP_RS04260 are separated by 21 nucleotides
MMP_RS04260 and MMP_RS04265 are separated by 10 nucleotides
MMP_RS04245: MMP_RS04245 - right-handed parallel beta-helix repeat-containing protein, at 808,687 to 810,939
_RS04245
MMP_RS04250: MMP_RS04250 - PC4/YdbC family ssDNA-binding protein, at 811,265 to 811,486
_RS04250
MMP_RS04255: MMP_RS04255 - coenzyme F420 hydrogenase subunit beta, at 811,639 to 812,487
_RS04255
MMP_RS04260: MMP_RS04260 - coenzyme F420 hydrogenase subunit gamma, at 812,509 to 813,237
_RS04260
MMP_RS04265: MMP_RS04265 - coenzyme F420-reducing hydrogenase FrhD protein, at 813,248 to 813,748
_RS04265
Group
Condition
MMP
_RS04245
MMP
_RS04250
MMP
_RS04255
MMP
_RS04260
MMP
_RS04265
stress
McCas_H2_complete gold (III) chloride 0.0357142857142857 mM
-0.1
-0.5
-1.1
-0.6
-1.1
stress
McCas_H2_complete metronidazole 0.000833333333333333
-0.4
-0.4
-1.5
+0.1
-0.7
nitrogen source
H2 N-free with 10mM L-Glutamic
-0.3
-0.4
-0.8
+0.1
-1.6
stress
McCas_H2_complete Irgasan 0.025 mM
-0.3
-0.7
-0.5
-0.7
-0.8
stress
McCas_H2_complete metronidazole 0.00833333333333333 mM
-0.2
-0.2
-1.2
-0.2
-1.1
nutrient t2
H2 deepwell acetate FREE
-0.1
-0.3
-0.8
+0.2
-1.4
stress
McCas_H2_complete silver chloride 0.5 mM
-0.3
-0.8
-0.4
-0.3
-0.7
stress
McCas_H2_complete Fluorophosphate 62.5 mM
-0.0
-0.5
-0.4
-0.4
-1.1
stress
McCas_H2_complete gold (III) chloride 0.0357142857142857 mM
-0.0
-0.6
-0.4
-0.4
-1.1
no stress control
McCas_H2_complete no stress control
-0.3
-0.2
-1.1
+0.1
-0.9
nitrogen source
H2 N-free with 10mM L-Valine
-0.2
-0.1
-1.1
+0.2
-1.0
nitrogen source
H2 N-free with 10mM L-Methionine
-0.3
-0.5
-1.0
+0.3
-0.8
stress
McCas_formate_complete gold (III) chloride 0.0714285714285714 mM
-0.1
+0.3
-0.9
-0.9
-0.7
nitrogen source
H2 N-free with 5mM Inosine
-0.3
+0.1
-0.1
-0.0
-1.9
nitrogen source
N2 fixation, H2 media
-0.2
-0.4
-0.9
+0.2
-0.9
nitrogen source
H2 N-free with 10mM L-Isoleucine
-0.2
-0.4
-0.9
+0.2
-0.7
nitrogen source
H2 N-free with 2mM Thymine
-0.3
-0.2
-0.5
+0.4
-1.3
stress
McCas_H2_complete Chloride 500 mM
-0.3
-0.5
-1.1
+0.4
-0.4
nitrogen source
H2 N-free with 10mM Thymidine
-0.2
-0.0
-1.1
+0.3
-0.7
nitrogen source
H2 N-free with 10mM L-Proline
-0.2
-0.0
-1.0
+0.4
-0.9
stress
McCas_H2_complete Chlorate 250 mM
-0.0
-0.9
-1.2
+0.5
-0.0
stress
McCas_H2_complete Chloride 250 mM
-0.1
-1.0
-0.5
-0.2
+0.6
stress
McCas_H2_complete Strontium chloride 125 mM
-0.0
-1.0
-0.6
+0.6
-0.3
no stress control
McCas_H2_complete no stress control
-0.1
-0.5
-1.0
-0.3
+0.9
stress
McCas_H2_complete sodium nitrite 1.04166666666667 mM
-0.3
-0.5
-0.6
-0.3
+0.8
no stress control
McCas_H2_complete no stress control
-0.2
-0.7
-0.8
-0.1
+1.1
no stress control
McCas_H2_complete no stress control
-0.2
-0.4
-0.8
-0.2
+1.1
nutrient t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
-0.0
-0.8
+1.3
-0.3
-0.6
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
-0.2
-0.3
-0.7
+1.3
-0.1
stress
McCas_H2_complete sulfate 125 mM
-0.2
+0.4
-0.5
+0.7
+2.5
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