Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS04205 and MMP_RS04210 are separated by 145 nucleotidesMMP_RS04210 and MMP_RS04215 are separated by 11 nucleotidesMMP_RS04215 and MMP_RS04220 are separated by 48 nucleotidesMMP_RS04220 and MMP_RS04225 are separated by 86 nucleotides MMP_RS04205: MMP_RS04205 - carboxymuconolactone decarboxylase family protein, at 799,477 to 800,229 _RS04205 MMP_RS04210: MMP_RS04210 - aldo/keto reductase, at 800,375 to 801,568 _RS04210 MMP_RS04215: MMP_RS04215 - nickel pincer cofactor biosynthesis protein LarB, at 801,580 to 802,365 _RS04215 MMP_RS04220: MMP_RS04220 - queuosine precursor transporter, at 802,414 to 803,022 _RS04220 MMP_RS04225: MMP_RS04225 - hypothetical protein, at 803,109 to 803,621 _RS04225
Group Condition MMP_RS04205 MMP_RS04210 MMP_RS04215 MMP_RS04220 MMP_RS04225
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE +0.1 -1.1 -9.7 +0.3 -0.2
nutrient t2 H2 deepwell casamino FREE +0.4 -0.6 -9.7 -0.1 -0.3
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE +0.2 -0.8 -9.5 +0.1 -0.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.1 -0.4 -9.8 +0.1 -0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.0 -0.1 -9.3 +0.0 -0.2
nutrient t1 Formate deepwell casamino FREE -0.2 -0.4 -8.6 -0.0 -0.2
nutrient t2 H2 deepwell casamino FREE -0.4 -0.6 -8.1 -0.2 +0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE +0.0 -0.9 -8.3 +0.1 -0.2
nutrient t2 H2 deepwell vitamin and casamino FREE +0.0 -0.4 -8.4 -0.0 -0.2
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.3 -0.5 -8.6 -0.1 -0.1
nutrient t2 H2 deepwell casamino FREE -0.1 -0.5 -7.7 -0.3 -0.5
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE +0.1 -0.8 -8.2 +0.1 -0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE +0.2 -1.0 -8.1 +0.2 -0.2
nutrient t2 Formate deepwell vitamin and casamino FREE -0.3 -0.4 -7.2 -0.1 +0.1
nutrient t2 Formate deepwell autotrophic conditions -0.4 -0.5 -6.9 -0.0 -0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE +0.0 -0.6 -6.8 +0.0 -0.3
nutrient t1 Formate deepwell casamino FREE -0.0 -0.4 -7.2 -0.1 +0.1
nutrient t2 H2 deepwell vitamin and casamino FREE -0.2 -0.6 -6.6 +0.1 -0.3
nutrient t1 Formate deepwell casamino FREE -0.1 -0.4 -7.0 +0.0 +0.0
nutrient t2 H2 deepwell acetate and casamino FREE -0.9 -0.5 -5.9 -0.6 +0.4
nutrient t2 Formate deepwell vitamin and casamino FREE -0.1 -0.4 -7.0 -0.0 +0.1
nutrient t2 Formate deepwell acetate and casamino FREE -0.1 -0.4 -6.6 -0.0 -0.1
nutrient t2 Formate deepwell autotrophic conditions -0.1 -0.4 -6.7 +0.0 -0.1
nutrient t2 H2 deepwell vitamin and casamino FREE +0.3 -0.5 -6.9 +0.0 -0.0
nutrient t2 Formate deepwell vitamin and casamino FREE -0.1 -0.4 -6.5 -0.0 +0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations +0.5 -1.8 -5.2 -0.1 -0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +0.4 -1.0 -5.8 +0.1 -0.6
nutrient t2 Formate deepwell acetate and casamino FREE +0.1 -0.3 -6.3 +0.1 -0.1
nutrient t2 H2 deepwell autotrophic conditions +0.3 -0.6 -6.2 +0.1 -0.1
nutrient t2 H2 deepwell autotrophic conditions +0.3 -0.4 -6.1 -0.1 -0.0
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