Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS04080 and MMP_RS04085 are separated by 287 nucleotidesMMP_RS04085 and MMP_RS04090 overlap by 23 nucleotidesMMP_RS04090 and MMP_RS04095 are separated by 103 nucleotidesMMP_RS04095 and MMP_RS09005 are separated by 1016 nucleotides MMP_RS04080: MMP_RS04080 - tRNA-Ser, at 773,425 to 773,511 _RS04080 MMP_RS04085: MMP_RS04085 - hypothetical protein, at 773,799 to 775,298 _RS04085 MMP_RS04090: MMP_RS04090 - hypothetical protein, at 775,276 to 775,686 _RS04090 MMP_RS04095: MMP_RS04095 - serine protease, at 775,790 to 776,566 _RS04095 MMP_RS09005: MMP_RS09005 - hypothetical protein, at 777,583 to 777,738 _RS09005
Group Condition MMP_RS04080 MMP_RS04085 MMP_RS04090 MMP_RS04095 MMP_RS09005
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. -0.1 -8.9 -0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. -0.2 -8.7 -0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 10 generations N.D. -0.2 -8.6 -0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. -0.1 -8.5 -0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 10 generations N.D. -0.1 -8.6 -0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. -0.2 -8.5 -0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 10 generations N.D. -0.0 -8.6 -0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. -0.1 -8.6 -0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations N.D. -0.3 -8.0 -0.3 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. -0.1 -8.5 -0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 10 generations N.D. -0.0 -8.4 -0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. -0.2 -8.1 -0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations N.D. -0.3 -7.5 -0.6 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 10 generations N.D. -0.0 -8.5 +0.1 N.D.
stress McCas_formate_complete Chloride 250 mM N.D. +0.2 -7.0 -0.1 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE N.D. -0.1 -6.2 -0.1 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE N.D. -0.1 -6.2 +0.0 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 10 generations N.D. -0.1 -6.1 -0.1 N.D.
stress McCas_formate_complete Fluorophosphate 62.5 mM N.D. +0.0 -6.4 +0.2 N.D.
stress McCas_formate_complete Rifampicin 0.5 mM N.D. -0.0 -5.9 +0.2 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE N.D. +0.0 -5.7 +0.1 N.D.
nutrient t2 H2 deepwell casamino FREE N.D. -0.1 -5.0 -0.1 N.D.
rich t2 H2 McCas deepwell complete N.D. +0.0 -5.0 -0.1 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE N.D. -0.0 -4.7 -0.1 N.D.
nitrogen source H2 N-free with 10mM L-Lysine N.D. +0.1 -4.8 -0.0 N.D.
nutrient t2 H2 deepwell casamino FREE N.D. +0.1 -4.7 -0.1 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE N.D. +0.0 -4.6 -0.0 N.D.
stress McCas_H2_complete dimetridazole 0.000833333333333333 mM N.D. -0.1 -4.3 -0.0 N.D.
nitrogen source H2 N-free with 10mM Thymidine N.D. -0.1 -4.3 +0.0 N.D.
nitrogen source H2 N-free with 10mM L-Ornithine N.D. -0.1 -4.3 +0.0 N.D.
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