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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS04025 and MMP_RS04030 are separated by 126 nucleotides
MMP_RS04030 and MMP_RS04035 are separated by 192 nucleotides
MMP_RS04035 and MMP_RS04040 are separated by 5 nucleotides
MMP_RS04040 and MMP_RS04045 are separated by 11 nucleotides
MMP_RS04025: MMP_RS04025 - ATPase AAA, at 763,723 to 765,075
_RS04025
MMP_RS04030: MMP_RS04030 - hypothetical protein, at 765,202 to 765,603
_RS04030
MMP_RS04035: MMP_RS04035 - hypothetical protein, at 765,796 to 766,236
_RS04035
MMP_RS04040: MMP_RS04040 - hypothetical protein, at 766,242 to 766,721
_RS04040
MMP_RS04045: MMP_RS04045 - hypothetical protein, at 766,733 to 767,473
_RS04045
Group
Condition
MMP
_RS04025
MMP
_RS04030
MMP
_RS04035
MMP
_RS04040
MMP
_RS04045
stress
McCas_formate_complete Chloride 250 mM
-0.1
+0.4
-2.0
-0.2
-0.1
stress
McCas_H2_complete Chlorate 250 mM
+0.1
-0.1
-1.4
-0.1
-0.5
natural competence
H2 McCas- cells incubated with 5000 ng DNA (pDNA pLW40neo) then transferred and grown in liquid medium with neomycin
-0.2
-0.3
-0.5
-0.6
-0.2
stress
McCas_H2_complete metavanadate 4.54545454545455 mM
-0.1
-0.1
-0.6
-0.6
-0.5
stress
McCas_formate_complete metavanadate 4.54545454545455 mM
-0.3
-0.6
-0.6
-0.1
-0.2
stress
McCas_H2_complete Magnesium chloride 250 mM
-0.2
-0.2
-0.8
-0.4
-0.3
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
-0.3
+0.0
-0.5
-0.4
-0.5
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-0.2
-0.1
-1.3
+0.2
-0.1
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
-0.2
+0.2
-0.7
-0.4
-0.3
stress
McCas_formate_complete hypophosphite 125 mM
-0.2
-0.1
-1.2
+0.3
-0.1
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
+0.5
-0.1
-1.8
+0.2
-0.0
stress
McCas_H2_complete Spiramycin 0.1 mM
-0.1
+0.9
-1.0
-0.4
-0.6
stress
McCas_formate_complete Econazole nitrate salt 0.02 mM
-0.1
+0.1
-1.1
-0.3
+0.3
stress
McCas_H2_complete rubidium chloride 125 mM
+0.1
-0.4
-0.6
+0.7
-0.2
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
-0.1
+0.7
-0.4
-0.5
+0.2
nutrient t2
H2 deepwell acetate FREE
-0.1
-0.6
+0.9
+0.2
-0.4
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
+0.0
+0.7
-0.6
-0.4
+0.3
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
-0.1
-0.3
+0.5
+0.8
-0.5
stress
McCas_H2_complete sulfate 125 mM
+0.2
+0.2
+1.0
-0.4
-0.5
stress
H2 50 mM hypophosphite
-0.4
+0.5
+0.8
+0.0
-0.3
stress
McCas_formate_complete 3-nitroxypropanol 0.00833333333333333 mM
+0.0
-0.3
+1.9
-0.6
-0.3
stress
McCas_H2_complete Bacitracin 0.003125 mM
-0.0
-0.1
+1.4
-0.0
-0.3
no stress control
McCas_H2_complete no stress control
-0.2
+0.2
+1.3
+0.1
-0.1
stress
McCas_H2_complete Lithium chloride 250 mM
-0.2
+0.4
+1.1
+0.0
-0.0
stress
McCas_formate_complete dimetridazole 0.00416666666666667 mM
+0.6
-0.2
-0.1
+0.6
+0.5
stress
McCas_H2_complete Rifampicin 0.5 mM
+0.3
+0.1
+1.8
-0.1
-0.4
stress
McCas_H2_complete Antimycin A 0.01 mM
-0.1
+0.1
+1.5
+0.1
+0.2
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
-0.2
-0.1
+2.4
-0.0
-0.2
stress
McCas_H2_complete perchlorate 250 mM
+0.4
+0.5
+0.5
+0.4
+0.4
stress
McCas_H2_complete Econazole nitrate salt 0.02 mM
+0.1
+0.4
+1.8
+0.0
+0.1
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