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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS04015 and MMP_RS04020 are separated by 11 nucleotides
MMP_RS04020 and MMP_RS04025 are separated by 9 nucleotides
MMP_RS04025 and MMP_RS04030 are separated by 126 nucleotides
MMP_RS04030 and MMP_RS04035 are separated by 192 nucleotides
MMP_RS04015: MMP_RS04015 - hypothetical protein, at 762,446 to 762,937
_RS04015
MMP_RS04020: MMP_RS04020 - hypothetical protein, at 762,949 to 763,713
_RS04020
MMP_RS04025: MMP_RS04025 - ATPase AAA, at 763,723 to 765,075
_RS04025
MMP_RS04030: MMP_RS04030 - hypothetical protein, at 765,202 to 765,603
_RS04030
MMP_RS04035: MMP_RS04035 - hypothetical protein, at 765,796 to 766,236
_RS04035
Group
Condition
MMP
_RS04015
MMP
_RS04020
MMP
_RS04025
MMP
_RS04030
MMP
_RS04035
nitrogen source
Formate N-free with 2mM Adenosine
-2.4
-0.5
-0.1
-0.3
-0.2
stress
McCas_H2_complete Fluorophosphate 62.5 mM
-1.7
-0.7
-0.2
+0.0
-0.5
no stress control
McCas_H2_complete no stress control
-1.1
-0.3
-0.4
+0.1
-0.6
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-0.4
-0.3
-0.2
-0.1
-1.3
nitrogen source
H2 N-free with 10mM NAG
-1.6
-0.7
-0.1
-0.1
+0.4
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
-1.4
-0.1
+0.2
-0.3
-0.5
stress
Formate with Bacitracin 15.6 uM
-0.9
+0.1
-0.1
+0.1
-1.2
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
-1.4
-0.4
+0.1
-0.5
+0.4
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
-0.4
+0.0
+0.5
-0.1
-1.8
stress
McCas_formate_complete Chloride 250 mM
+0.5
-0.3
-0.1
+0.4
-2.0
no stress control
McCas_H2_complete no stress control
-1.1
+0.3
-0.3
+0.3
-0.6
stress
McCas_H2_complete Spiramycin 0.1 mM
-0.9
-0.1
-0.1
+0.9
-1.0
stress
McCas_formate_complete 2-bromoethanesulfonic 0.1 mM
-1.9
-0.0
-0.0
+0.4
+0.8
stress
H2 50 mM hypophosphite
-1.2
+0.1
-0.4
+0.5
+0.8
nutrient t2
H2 deepwell acetate FREE
-0.8
+0.6
-0.1
-0.6
+0.9
stress
McCas_formate_complete 2-bromoethanesulfonic 0.00833333333333333 mM
+1.1
-0.6
+0.0
-0.2
-0.5
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
+1.0
-0.3
-0.2
+0.2
-0.7
stress
McCas_formate_complete arsenate 0.416666666666667 mM
+0.5
-0.5
-0.2
-0.5
+0.8
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
+1.0
-0.2
-0.1
-0.7
+0.4
stress
McCas_H2_complete Antimycin A 0.01 mM
-0.6
+0.1
-0.1
+0.1
+1.5
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
-0.7
+1.6
+0.0
+0.7
-0.6
stress
McCas_H2_complete Bacitracin 0.003125 mM
+0.4
-0.5
-0.0
-0.1
+1.4
stress
McCas_formate_complete 3-nitroxypropanol 0.00833333333333333 mM
+0.5
-0.3
+0.0
-0.3
+1.9
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
+0.1
-0.2
-0.2
-0.1
+2.4
stress
McCas_formate_complete Fluorophosphate 62.5 mM
+1.2
+0.1
+0.4
-0.0
+0.6
stress
McCas_H2_complete perchlorate 250 mM
+0.2
+0.7
+0.4
+0.5
+0.5
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
+1.5
+0.2
+0.2
-0.0
+0.6
stress
McCas_H2_complete Rifampicin 0.5 mM
+0.3
+0.2
+0.3
+0.1
+1.8
stress
McCas_H2_complete Econazole nitrate salt 0.02 mM
+0.4
+0.4
+0.1
+0.4
+1.8
stress
McCas_H2_complete Bacitracin 0.003125 mM
+1.7
+0.8
+0.2
+0.3
+0.4
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