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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS03995 and MMP_RS04000 are separated by 7 nucleotides
MMP_RS04000 and MMP_RS04005 are separated by 11 nucleotides
MMP_RS04005 and MMP_RS04010 are separated by 360 nucleotides
MMP_RS04010 and MMP_RS04015 are separated by 0 nucleotides
MMP_RS03995: MMP_RS03995 - flippase-like domain-containing protein, at 757,172 to 758,122
_RS03995
MMP_RS04000: MMP_RS04000 - NAD(P)/FAD-dependent oxidoreductase, at 758,130 to 759,548
_RS04000
MMP_RS04005: MMP_RS04005 - hypothetical protein, at 759,560 to 761,332
_RS04005
MMP_RS04010: MMP_RS04010 - ABC transporter substrate-binding protein, at 761,693 to 762,445
_RS04010
MMP_RS04015: MMP_RS04015 - hypothetical protein, at 762,446 to 762,937
_RS04015
Group
Condition
MMP
_RS03995
MMP
_RS04000
MMP
_RS04005
MMP
_RS04010
MMP
_RS04015
nitrogen source
Formate N-free with 2mM Adenosine
+0.2
-0.0
+0.1
-0.2
-2.4
stress
McCas_formate_complete 2-bromoethanesulfonic 0.1 mM
-0.0
+0.1
+0.0
-0.1
-1.9
nitrogen source
H2 N-free with 10mM NAG
-0.2
+0.1
-0.2
+0.2
-1.6
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-0.2
+0.1
-0.1
-0.3
-1.1
stress
McCas_H2_complete Phenazine methosulfate 0.0333333333333333 mM
-0.3
-0.1
-0.2
+0.1
-1.0
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
-0.6
-0.0
-0.2
+0.1
-0.7
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
-0.5
+0.1
+0.2
+0.3
-1.4
stress
McCas_formate_complete Novobiocin 0.025 mM
-0.2
+0.0
+0.2
+0.1
-1.3
stress
McCas_formate_complete Chloride 500 mM
-0.2
-0.1
+0.2
+0.1
-1.3
stress
McCas_H2_complete Fluorophosphate 62.5 mM
+0.0
+0.1
+0.2
+0.4
-1.7
nitrogen source
H2 N-free with 10mM L-Serine
+0.2
+0.2
-0.1
+0.2
-1.3
stress
McCas_formate_complete Spiramycin 0.1 mM
-0.1
+0.2
+0.1
+0.2
-1.2
nitrogen source
H2 N-free with 10mM L-Serine
+0.3
+0.3
-0.0
-0.1
-1.1
no stress control
McCas_H2_complete no stress control
+0.1
+0.3
-0.2
+0.2
-1.1
no stress control
McCas_H2_complete no stress control
+0.1
+0.4
+0.1
+0.2
-1.1
stress
McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
-0.5
+0.0
-0.4
+0.4
+0.3
stress
McCas_H2_complete Chlorpromazine 0.0333333333333333 mM
-0.2
+0.3
-0.1
+0.6
-0.5
nitrogen source
H2 N-free with 10mM Cytidine
-0.3
+0.2
-0.3
-0.2
+0.8
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
-0.5
-0.1
+0.0
+0.0
+1.0
stress
McCas_H2_complete Chloride 250 mM
+0.4
+0.4
+0.1
+0.4
-0.7
stress
McCas_formate_complete Fluorophosphate 62.5 mM
-0.2
+0.2
-0.1
-0.2
+1.2
nutrient t2
H2 deepwell vitamin and casamino FREE
-0.2
+0.1
-0.1
-0.0
+1.3
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
-0.1
-0.0
-0.1
+0.6
+0.9
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
-0.1
+0.4
+0.0
+0.1
+1.0
no stress control
McCas_H2_complete no stress control
+0.1
+0.3
+0.0
+0.2
+1.1
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
-0.2
+0.3
-0.1
+0.2
+1.5
stress
McCas_H2_complete Chloride 250 mM
+0.1
+0.2
-0.1
+0.6
+1.0
stress
McCas_H2_complete Bacitracin 0.003125 mM
+0.0
+0.3
-0.2
+0.2
+1.7
no stress control
McCas_H2_complete no stress control
+0.1
+0.0
+0.0
+0.3
+1.6
stress
McCas_H2_complete perchlorate 250 mM
+0.7
+0.8
+0.6
+0.8
+0.2
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