Fitness for 5 genes in Methanococcus maripaludis S2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MMP_RS03695	MMP_RS03700	MMP_RS03705	MMP_RS03710	MMP_RS03715
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations	N.D.	-7.7	N.D.	N.D.	-0.4
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations	N.D.	-7.6	N.D.	N.D.	-0.2
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations	N.D.	-7.6	N.D.	N.D.	-0.0
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations	N.D.	-7.0	N.D.	N.D.	-0.1
nutrient t2	H2 deepwell casamino FREE	N.D.	-6.7	N.D.	N.D.	-0.4
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations	N.D.	-7.1	N.D.	N.D.	+0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations	N.D.	-7.1	N.D.	N.D.	+0.1
nutrient t2	H2 deepwell casamino FREE	N.D.	-6.7	N.D.	N.D.	-0.2
nutrient t2	H2 deepwell casamino FREE	N.D.	-6.0	N.D.	N.D.	-0.6
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations	N.D.	-6.4	N.D.	N.D.	-0.0
nutrient t2	H2 deepwell vitamin and casamino FREE	N.D.	-6.0	N.D.	N.D.	-0.3
nutrient t2	H2 deepwell vitamin and casamino FREE	N.D.	-6.1	N.D.	N.D.	-0.2
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 10 generations	N.D.	-6.4	N.D.	N.D.	+0.1
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	N.D.	-6.1	N.D.	N.D.	-0.0
nutrient t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE	N.D.	-6.1	N.D.	N.D.	-0.1
nutrient t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE	N.D.	-6.0	N.D.	N.D.	-0.1
nutrient t2	H2 deepwell acetate and vitamin FREE	N.D.	-5.8	N.D.	N.D.	-0.1
nutrient t2	H2 deepwell acetate FREE	N.D.	-5.8	N.D.	N.D.	-0.1
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	N.D.	-5.8	N.D.	N.D.	-0.0
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations	N.D.	-5.9	N.D.	N.D.	-0.0
nutrient t2	H2 deepwell vitamin and casamino FREE	N.D.	-5.3	N.D.	N.D.	-0.5
nutrient t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE	N.D.	-5.7	N.D.	N.D.	-0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations	N.D.	-5.7	N.D.	N.D.	-0.0
nutrient t2	H2 deepwell autotrophic conditions	N.D.	-5.0	N.D.	N.D.	-0.6
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	N.D.	-5.5	N.D.	N.D.	-0.1
natural competence	H2 McCas- cells grown in liquid medium with neomycin	N.D.	+6.3	N.D.	N.D.	+0.3
stress	Formate with Neomycin 12.5 mM	N.D.	+6.1	N.D.	N.D.	+0.8
natural competence	H2 McCas- cells grown in liquid medium with neomycin	N.D.	+7.3	N.D.	N.D.	+0.3
natural competence	H2 McCas- cells grown in liquid medium with neomycin	N.D.	+7.3	N.D.	N.D.	+0.3
natural competence	H2 McCas- cells incubated with 5000 ng DNA (pDNA pLW40neo) then transferred and grown in liquid medium with neomycin	N.D.	+7.7	N.D.	N.D.	+0.2