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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS03670 and MMP_RS03675 are separated by 36 nucleotides
MMP_RS03675 and MMP_RS03680 are separated by 4 nucleotides
MMP_RS03680 and MMP_RS03685 are separated by 40 nucleotides
MMP_RS03685 and MMP_RS03690 are separated by 92 nucleotides
MMP_RS03670: MMP_RS03670 - DUF1890 domain-containing protein, at 691,982 to 692,425
_RS03670
MMP_RS03675: MMP_RS03675 - RimK family alpha-L-glutamate ligase, at 692,462 to 693,340
_RS03675
MMP_RS03680: MMP_RS03680 - hypothetical protein, at 693,345 to 694,367
_RS03680
MMP_RS03685: MMP_RS03685 - Mrp/NBP35 family ATP-binding protein, at 694,408 to 695,277
_RS03685
MMP_RS03690: MMP_RS03690 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 695,370 to 696,470
_RS03690
Group
Condition
MMP
_RS03670
MMP
_RS03675
MMP
_RS03680
MMP
_RS03685
MMP
_RS03690
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations
+0.5
+0.7
+0.1
-4.7
N.D.
stress
Formate 100 mM hypophosphite
+0.1
+0.1
-0.6
-2.6
N.D.
stress
Formate 100 mM hypophosphite
+0.2
+0.0
-0.4
-2.7
N.D.
stress
Formate 100 mM hypophosphite
-0.1
-0.0
-0.1
-2.4
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations
-0.2
+0.2
-0.1
-2.2
N.D.
stress
Formate with hypochlorite 5 mM
-0.1
+0.0
-0.4
-1.9
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-0.8
-0.3
+0.6
-1.5
N.D.
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
-0.6
+0.4
-0.0
-1.8
N.D.
stress
McCas_H2_complete Chlorate 250 mM
-0.8
+0.4
-0.8
-0.7
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
-0.6
-0.5
+0.2
-1.0
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-0.2
-0.3
+0.6
-1.9
N.D.
nitrogen source
H2 N-free with 10mM L-Phenylalanine
-0.6
+0.4
-1.1
-0.3
N.D.
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
+0.3
+0.3
+0.5
-2.1
N.D.
stress
McCas_formate_complete sodium bromide 250 mM
-0.5
+0.9
-0.9
-0.3
N.D.
stress
McCas_H2_complete Chloride 500 mM
+0.6
+0.3
-0.9
-0.6
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations
+0.6
+0.7
+0.1
-1.3
N.D.
stress
McCas_formate_complete sulfate 125 mM
-0.1
+0.9
-1.1
+0.5
N.D.
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
-0.1
+0.9
-1.0
+0.4
N.D.
stress
McCas_formate_complete Rifampicin 0.5 mM
-0.2
+0.8
-0.9
+0.7
N.D.
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
+0.2
+0.8
-0.9
+0.5
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations
+0.8
+1.0
+0.1
-1.2
N.D.
stress
McCas_formate_complete Novobiocin 0.025 mM
-0.4
+0.9
-0.4
+0.7
N.D.
stress
McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
+0.3
+1.2
-0.9
+0.2
N.D.
stress
Formate with Bacitracin 15.6 uM
+0.7
+0.9
+0.2
-1.0
N.D.
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
-0.4
+1.3
-0.6
+0.8
N.D.
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
-0.2
+1.3
-0.5
+0.8
N.D.
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
+0.4
+1.2
-0.6
+0.5
N.D.
stress
McCas_formate_complete dimetridazole 0.00416666666666667 mM
+0.3
+1.4
-0.7
+0.4
N.D.
stress
McCas_formate_complete arsenate 0.416666666666667 mM
+1.0
+0.9
-0.4
+0.3
N.D.
stress
McCas_formate_complete nitrate 35.7142857142857 mM
-0.2
+1.3
-0.3
+1.1
N.D.
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