Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS03625 and MMP_RS03630 are separated by 65 nucleotidesMMP_RS03630 and MMP_RS03635 are separated by 83 nucleotidesMMP_RS03635 and MMP_RS03640 are separated by 134 nucleotidesMMP_RS03640 and MMP_RS03645 are separated by 95 nucleotides MMP_RS03625: MMP_RS03625 - cell wall-binding protein, at 680,170 to 681,129 _RS03625 MMP_RS03630: MMP_RS03630 - hypothetical protein, at 681,195 to 682,061 _RS03630 MMP_RS03635: MMP_RS03635 - beta-CASP ribonuclease aCPSF1, at 682,145 to 684,052 _RS03635 MMP_RS03640: MMP_RS03640 - archaeal proteasome endopeptidase complex subunit beta, at 684,187 to 684,846 _RS03640 MMP_RS03645: MMP_RS03645 - proline--tRNA ligase, at 684,942 to 686,324 _RS03645
Group Condition MMP_RS03625 MMP_RS03630 MMP_RS03635 MMP_RS03640 MMP_RS03645
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations +0.4 -0.2 N.D. -8.5 N.D.
nutrient t1 Formate deepwell casamino FREE -0.1 -0.1 N.D. -7.6 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -0.1 -0.2 N.D. -7.5 N.D.
nutrient t2 Formate deepwell autotrophic conditions +0.0 -0.2 N.D. -7.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations +0.1 -0.1 N.D. -7.5 N.D.
nutrient t2 Formate deepwell autotrophic conditions -0.1 -0.1 N.D. -7.3 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -0.2 -0.1 N.D. -7.1 N.D.
nutrient t2 H2 deepwell acetate FREE -0.5 -0.3 N.D. -6.6 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -0.1 -0.1 N.D. -7.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +0.7 -0.4 N.D. -7.7 N.D.
nutrient t2 Formate deepwell autotrophic conditions +0.0 -0.1 N.D. -6.9 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -0.2 -0.1 N.D. -6.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations +0.3 -0.2 N.D. -6.9 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations +0.6 -0.2 N.D. -7.1 N.D.
nutrient t2 H2 deepwell acetate FREE -0.3 -0.1 N.D. -6.4 N.D.
nutrient t2 Formate deepwell vitamin and casamino FREE -0.2 +0.0 N.D. -6.5 N.D.
stress McCas_H2_complete metavanadate 4.54545454545455 mM -0.8 -0.1 N.D. -5.7 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -0.3 -0.2 N.D. -6.1 N.D.
nutrient t2 Formate deepwell vitamin and casamino FREE +0.1 -0.1 N.D. -6.6 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -0.2 +0.0 N.D. -6.3 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +0.6 -0.0 N.D. -6.8 N.D.
nutrient t2 H2 deepwell acetate FREE -0.4 -0.4 N.D. -5.2 N.D.
nutrient t2 H2 deepwell acetate and vitamin FREE -0.1 -0.2 N.D. -5.6 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -0.1 -0.1 N.D. -5.5 N.D.
stress H2 McCas with 0.1 mM Na2S -0.6 +0.1 N.D. -5.2 N.D.
no stress control McCas_H2_complete no stress control -0.4 -0.2 N.D. -5.0 N.D.
nutrient t2 H2 deepwell autotrophic conditions +0.6 -0.2 N.D. -5.5 N.D.
nutrient t2 H2 deepwell acetate and casamino FREE +0.5 -0.4 N.D. -4.9 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +1.0 -0.1 N.D. -5.0 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.9 -0.2 N.D. -4.4 N.D.
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