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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS03500 and MMP_RS03505 are separated by 29 nucleotides
MMP_RS03505 and MMP_RS03510 are separated by 12 nucleotides
MMP_RS03510 and MMP_RS03515 are separated by 85 nucleotides
MMP_RS03515 and MMP_RS03520 are separated by 9 nucleotides
MMP_RS03500: MMP_RS03500 - 30S ribosomal protein S2, at 657,133 to 657,795
_RS03500
MMP_RS03505: MMP_RS03505 - hypothetical protein, at 657,825 to 658,433
_RS03505
MMP_RS03510: MMP_RS03510 - 30S ribosomal protein S3ae, at 658,446 to 659,123
_RS03510
MMP_RS03515: MMP_RS03515 - DMT family transporter, at 659,209 to 660,099
_RS03515
MMP_RS03520: MMP_RS03520 - YwbE family protein, at 660,109 to 660,303
_RS03520
Group
Condition
MMP
_RS03500
MMP
_RS03505
MMP
_RS03510
MMP
_RS03515
MMP
_RS03520
stress
McCas_formate_complete Novobiocin 0.025 mM
N.D.
N.D.
N.D.
-0.4
-1.8
stress
McCas_formate_complete nitrate 35.7142857142857 mM
N.D.
N.D.
N.D.
-0.2
-1.6
nitrogen source
H2 N-free with 10mM Cytidine
N.D.
N.D.
N.D.
-0.1
-1.6
nutrient t2
H2 deepwell acetate FREE
N.D.
N.D.
N.D.
-0.3
-1.4
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
N.D.
N.D.
N.D.
+0.4
-1.9
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
N.D.
N.D.
N.D.
-0.2
-1.2
stress
McCas_H2_complete Chlorpromazine 0.0333333333333333 mM
N.D.
N.D.
N.D.
-0.4
-1.0
nitrogen source
H2 N-free with 10mM Putrescine
N.D.
N.D.
N.D.
-0.1
-1.2
nitrogen source
H2 N-free with 2.5mM Cytosine
N.D.
N.D.
N.D.
-0.1
-1.3
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
N.D.
N.D.
N.D.
-0.0
-1.3
nitrogen source
H2 N-free with 10mM NAG
N.D.
N.D.
N.D.
-0.2
-1.1
nutrient t1
H2 deepwell vitamin FREE
N.D.
N.D.
N.D.
-0.2
-1.0
stress
McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
N.D.
N.D.
N.D.
-0.1
-1.1
stress
McCas_H2_complete Chloride 500 mM
N.D.
N.D.
N.D.
+0.1
-1.3
natural competence
H2 McCas- cells grown in liquid medium with neomycin
N.D.
N.D.
N.D.
-0.1
-1.1
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
N.D.
+0.3
-1.5
nutrient t1
formate McAA B12 dropout
N.D.
N.D.
N.D.
-0.1
-1.1
nitrogen source
H2 N-free with 10mM Glycine
N.D.
N.D.
N.D.
+0.1
-1.3
nitrogen source
H2 N-free with 10mM Gly-Glu
N.D.
N.D.
N.D.
+0.1
-1.2
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
N.D.
+0.5
-0.9
nutrient t2
H2 deepwell acetate FREE
N.D.
N.D.
N.D.
-0.2
+1.0
nutrient t1
H2 deepwell vitamin FREE
N.D.
N.D.
N.D.
-0.2
+1.1
stress
McCas_H2_complete Chloride 250 mM
N.D.
N.D.
N.D.
-0.2
+1.2
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
N.D.
N.D.
N.D.
+0.1
+1.3
nutrient t2
H2 deepwell acetate and casamino FREE
N.D.
N.D.
N.D.
+0.1
+1.2
nutrient t2
H2 deepwell autotrophic conditions
N.D.
N.D.
N.D.
-0.1
+1.5
stress
McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM
N.D.
N.D.
N.D.
+0.2
+1.3
stress
McCas_formate_complete Antimycin A 0.01 mM
N.D.
N.D.
N.D.
+0.1
+1.5
stress
McCas_H2_complete Bacitracin 0.003125 mM
N.D.
N.D.
N.D.
+0.1
+1.7
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
N.D.
N.D.
N.D.
+0.1
+2.4
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