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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS03470 and MMP_RS03475 overlap by 4 nucleotides
MMP_RS03475 and MMP_RS03480 are separated by 49 nucleotides
MMP_RS03480 and MMP_RS03485 are separated by 27 nucleotides
MMP_RS03485 and MMP_RS03490 are separated by 43 nucleotides
MMP_RS03470: MMP_RS03470 - phosphoadenosine phosphosulfate reductase family protein, at 651,185 to 652,060
_RS03470
MMP_RS03475: MMP_RS03475 - hypothetical protein, at 652,057 to 652,287
_RS03475
MMP_RS03480: MMP_RS03480 - SulP family inorganic anion transporter, at 652,337 to 653,956
_RS03480
MMP_RS03485: MMP_RS03485 - TIGR00267 family protein, at 653,984 to 654,544
_RS03485
MMP_RS03490: MMP_RS03490 - DUF2115 domain-containing protein, at 654,588 to 655,076
_RS03490
Group
Condition
MMP
_RS03470
MMP
_RS03475
MMP
_RS03480
MMP
_RS03485
MMP
_RS03490
rich t2
H2 McCas, 5g/L bicarb, 40 psi H2CO2
-0.5
-5.0
-0.1
-2.7
+0.3
stress
McCas_H2_complete 2-Mercaptopyridine N-oxide 0.02 mM
-0.5
-5.8
-0.1
-1.3
-0.1
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-0.1
-5.3
+0.0
-1.2
-1.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations
-0.2
-5.7
+0.1
-1.0
-0.8
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
-0.6
-5.5
+0.1
-0.7
-0.7
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
-0.3
-5.3
+0.1
-1.5
-0.5
stress
McCas_H2_complete Chlorpromazine 0.0333333333333333 mM
-0.4
-5.7
-0.2
-1.0
+0.1
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations
-0.4
-5.8
+0.1
-0.8
-0.2
stress
McCas_H2_complete gold (III) chloride 0.0357142857142857 mM
-0.6
-5.2
-0.1
-1.0
-0.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
+0.3
-5.0
+0.2
-2.3
+0.1
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations
+0.1
-5.4
-0.0
-1.0
-0.5
stress
H2 McCas with 10 mM Na2S
-0.4
-5.5
-0.1
-1.0
+0.2
no stress control
McCas_H2_complete no stress control
-0.5
-5.2
-0.1
-1.2
+0.6
stress
H2 McCas with 20 minute oxygen exposure
-0.1
-5.4
+0.1
-1.1
+0.2
no stress control
McCas_H2_complete no stress control
-0.4
-5.3
+0.1
-1.0
+0.5
stress
McCas_H2_complete Nitrofurantoin 0.1 mM
-0.4
-5.6
+0.1
-0.7
+0.6
stress
H2 McCas with 0.1 mM sulfite
-0.0
-5.4
+0.1
-1.0
+0.4
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
-0.2
-5.2
+0.3
-1.4
+0.7
stress
McCas_H2_complete Econazole nitrate salt 0.02 mM
-0.2
-5.1
-0.1
-1.2
+0.9
nitrogen source
H2 N-free with 10mM D-Alanine
-0.2
-4.4
+0.1
-1.6
+0.6
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
+0.0
-4.9
+0.0
-1.6
+1.1
stress
McCas_H2_complete Chloride 250 mM
+0.3
-4.9
+0.2
-1.1
+0.7
stress
McCas_H2_complete sulfate 125 mM
-0.1
-4.8
+0.5
-1.5
+1.2
nutrient t2
H2 deepwell acetate and vitamin FREE
+0.1
-4.5
-0.3
-1.0
+1.4
stress
McCas_formate_complete arsenate 0.416666666666667 mM
-0.4
-4.1
+0.4
+1.3
-1.0
stress
McCas_formate_complete Chloride 250 mM
-0.7
-3.9
+0.5
-0.5
+1.4
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
-0.7
-3.5
+0.4
+1.7
-1.0
stress
McCas_H2_complete Sulfaquinoxaline 0.1 mM
+0.1
-2.7
+0.3
-1.7
+2.2
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
-0.3
-1.7
-0.4
-1.1
+3.8
stress
Formate 100 mM hypophosphite
-0.8
-1.1
+0.1
+0.2
+7.5
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