Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS03405 and MMP_RS03410 are separated by 4 nucleotidesMMP_RS03410 and MMP_RS03415 are separated by 161 nucleotidesMMP_RS03415 and MMP_RS03420 are separated by 13 nucleotidesMMP_RS03420 and MMP_RS03425 are separated by 506 nucleotides MMP_RS03405: MMP_RS03405 - RNA 3'-terminal phosphate cyclase, at 638,656 to 639,675 _RS03405 MMP_RS03410: MMP_RS03410 - hypothetical protein, at 639,680 to 641,215 _RS03410 MMP_RS03415: MMP_RS03415 - acetolactate synthase large subunit, at 641,377 to 643,140 _RS03415 MMP_RS03420: MMP_RS03420 - acetolactate synthase small subunit, at 643,154 to 643,663 _RS03420 MMP_RS03425: MMP_RS03425 - hypothetical protein, at 644,170 to 644,622 _RS03425
Group Condition MMP_RS03405 MMP_RS03410 MMP_RS03415 MMP_RS03420 MMP_RS03425
nutrient t2 Formate deepwell acetate and casamino FREE +0.1 -0.3 N.D. -3.9 -0.2
nutrient t2 Formate deepwell acetate and casamino FREE -0.1 -0.3 N.D. -3.7 -0.0
nutrient t2 Formate deepwell autotrophic conditions +0.2 -0.9 N.D. -3.2 -0.2
nutrient t2 Formate deepwell autotrophic conditions +0.1 -0.9 N.D. -3.2 -0.0
nutrient t1 Formate deepwell casamino FREE -0.1 -0.4 N.D. -3.4 -0.1
nutrient t2 Formate deepwell autotrophic conditions +0.2 -0.6 N.D. -3.3 -0.1
nutrient t2 Formate deepwell acetate and casamino FREE +0.1 -0.4 N.D. -3.2 -0.1
nutrient t2 H2 deepwell autotrophic conditions -0.2 -0.2 N.D. -2.9 -0.3
nutrient t2 H2 deepwell autotrophic conditions -0.5 +0.1 N.D. -2.9 -0.2
nutrient t1 Formate deepwell casamino FREE +0.1 -0.3 N.D. -3.1 -0.0
nutrient t2 H2 deepwell acetate and casamino FREE -0.4 +0.2 N.D. -3.2 -0.1
nutrient t2 Formate deepwell vitamin and casamino FREE +0.2 -0.4 N.D. -3.1 -0.1
nutrient t1 Formate deepwell casamino FREE -0.0 -0.3 N.D. -3.0 -0.1
nutrient t2 H2 deepwell autotrophic conditions +0.2 -0.2 N.D. -2.9 -0.2
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -0.0 -0.4 N.D. -2.8 -0.1
nutrient t2 Formate deepwell vitamin and casamino FREE +0.1 -0.4 N.D. -2.8 +0.0
nutrient t2 Formate deepwell vitamin and casamino FREE +0.2 -0.4 N.D. -2.8 -0.0
nitrogen source H2 N-free with 10mM L-Valine -0.2 -0.2 N.D. -2.8 +0.2
nutrient t1 Formate deepwell vitamin and casamino FREE +0.3 -0.4 N.D. -2.5 -0.2
nitrogen source H2 N-free with 10mM L-Glutamic -0.2 -0.3 N.D. -2.6 +0.2
nutrient t2 H2 deepwell vitamin and casamino FREE -0.4 +0.0 N.D. -2.5 +0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -0.4 -2.5 N.D. +0.5 -0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -0.3 -2.2 N.D. +0.7 -0.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -0.2 -2.3 N.D. +0.9 -0.1
stress Formate 100 mM hypophosphite -0.8 -1.4 N.D. +3.1 -0.2
stress Formate 100 mM hypophosphite -0.6 -1.1 N.D. +2.9 -0.3
stress McCas_H2_complete metronidazole 0.00833333333333333 mM -0.2 -0.6 N.D. +2.7 +0.1
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine +0.5 -0.0 N.D. +3.1 +0.2
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine +0.2 -0.2 N.D. +3.4 +0.3
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine +0.6 +0.2 N.D. +3.1 +0.2
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