Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS03075 and MMP_RS03080 are separated by 422 nucleotidesMMP_RS03080 and MMP_RS03085 are separated by 4 nucleotidesMMP_RS03085 and MMP_RS03090 are separated by 25 nucleotidesMMP_RS03090 and MMP_RS03095 are separated by 116 nucleotides MMP_RS03075: MMP_RS03075 - valine--tRNA ligase, at 579,029 to 581,689 _RS03075 MMP_RS03080: MMP_RS03080 - universal stress protein, at 582,112 to 582,549 _RS03080 MMP_RS03085: MMP_RS03085 - endonuclease III, at 582,554 to 583,252 _RS03085 MMP_RS03090: MMP_RS03090 - cation:proton antiporter, at 583,278 to 584,447 _RS03090 MMP_RS03095: MMP_RS03095 - diphthine synthase, at 584,564 to 585,331 _RS03095
Group Condition MMP_RS03075 MMP_RS03080 MMP_RS03085 MMP_RS03090 MMP_RS03095
stress McCas_H2_complete Nitrofurantoin 0.1 mM N.D. -5.3 -0.3 -0.2 -0.7
stress McCas_H2_complete metronidazole 0.000833333333333333 N.D. -2.0 -0.8 -0.8 -1.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. -0.4 -0.1 -0.1 -4.7
stress McCas_H2_complete 8-hydroxy-nitroquinolone 0.0166666666666667 mM N.D. -3.1 -0.1 -0.7 -1.4
nitrogen source H2 N-free with 2.5mM Cytosine N.D. -1.0 +0.2 -2.8 -1.4
stress H2 McCas with 40 minute oxygen exposure N.D. -1.3 -0.0 -0.7 -2.8
stress McCas_H2_complete dimetridazole 0.000833333333333333 mM N.D. -2.5 -0.7 -0.6 -1.1
stress H2 McCas with 1 mM (NH4)2S control N.D. -1.8 -0.0 -0.3 -2.6
stress H2 McCas with 1 mM Na2S N.D. -1.3 +0.1 -0.9 -2.6
stress McCas_H2_complete Nitrofurantoin 0.1 mM N.D. -3.4 +0.3 -0.2 -1.3
stress H2 McCas with 40 minute oxygen exposure N.D. -1.6 -0.0 -0.6 -2.4
stress H2 McCas with 40 minute oxygen exposure N.D. -1.0 +0.0 -0.9 -2.7
stress McCas_H2_complete Lithium chloride 250 mM N.D. -2.3 -0.3 -0.5 -1.4
stress H2 McCas with 20 minute oxygen exposure N.D. -1.7 +0.0 -0.6 -2.3
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM N.D. -2.2 -0.2 +0.0 -2.1
stress McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM N.D. -2.2 +0.4 -0.4 -2.2
nitrogen source H2 N-free with 10mM L-Phenylalanine N.D. -0.8 +0.1 -2.1 -1.6
nitrogen source H2 N-free with 10mM L-Phenylalanine N.D. -0.7 +0.2 -2.2 -1.7
stress McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM N.D. -2.5 +0.2 -0.7 -1.2
nutrient t2 H2 deepwell acetate FREE N.D. -1.3 +0.3 -0.1 -3.0
stress McCas_H2_complete Antimycin A 0.01 mM N.D. -2.2 -0.1 +0.5 -1.7
stress McCas_H2_complete Strontium chloride 125 mM N.D. -2.2 -0.1 +0.6 -1.6
no stress control McCas_H2_complete no stress control N.D. -2.3 +0.3 +0.5 -1.5
stress McCas_H2_complete Hydroxylamine 2.08333333333333 mM N.D. -2.7 -0.1 +2.3 -2.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. +1.2 +0.1 -0.3 -3.2
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. +1.4 -0.2 -0.4 -2.8
nutrient t2 H2 deepwell autotrophic conditions N.D. -0.7 -0.5 +1.5 -2.1
nutrient t2 H2 deepwell autotrophic conditions N.D. +0.4 -0.1 +1.5 -2.7
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. +1.3 +0.0 +1.3 -3.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. +2.5 +0.0 +1.5 -2.5
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