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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS03065 and MMP_RS03070 overlap by 8 nucleotides
MMP_RS03070 and MMP_RS03075 are separated by 52 nucleotides
MMP_RS03075 and MMP_RS03080 are separated by 422 nucleotides
MMP_RS03080 and MMP_RS03085 are separated by 4 nucleotides
MMP_RS03065: MMP_RS03065 - AzlC family ABC transporter permease, at 577,959 to 578,675
_RS03065
MMP_RS03070: MMP_RS03070 - AzlD domain-containing protein, at 578,668 to 578,976
_RS03070
MMP_RS03075: MMP_RS03075 - valine--tRNA ligase, at 579,029 to 581,689
_RS03075
MMP_RS03080: MMP_RS03080 - universal stress protein, at 582,112 to 582,549
_RS03080
MMP_RS03085: MMP_RS03085 - endonuclease III, at 582,554 to 583,252
_RS03085
Group
Condition
MMP
_RS03065
MMP
_RS03070
MMP
_RS03075
MMP
_RS03080
MMP
_RS03085
stress
McCas_H2_complete Nitrofurantoin 0.1 mM
+0.9
-0.5
N.D.
-5.3
-0.3
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
+0.6
-1.0
N.D.
-2.5
-0.7
stress
McCas_formate_complete 3-nitroxypropanol 0.00833333333333333 mM
-0.0
-0.5
N.D.
-3.2
+0.6
stress
McCas_H2_complete silver chloride 0.5 mM
+0.6
-0.8
N.D.
-2.8
+0.1
stress
McCas_H2_complete 8-hydroxy-nitroquinolone 0.0166666666666667 mM
+0.9
-0.3
N.D.
-3.1
-0.1
stress
McCas_H2_complete Ticarcillin 50 mM
+0.4
-0.5
N.D.
-2.3
-0.3
stress
McCas_H2_complete Chloride 500 mM
+0.6
-0.9
N.D.
-2.0
-0.3
stress
McCas_H2_complete Irgasan 0.025 mM
+0.6
-1.2
N.D.
-2.1
+0.3
no stress control
McCas_H2_complete no stress control
+0.6
-1.3
N.D.
-1.7
-0.0
stress
McCas_H2_complete Spiramycin 0.1 mM
+0.6
-0.3
N.D.
-2.4
-0.1
stress
McCas_H2_complete Antimycin A 0.01 mM
+0.8
-0.8
N.D.
-2.2
-0.1
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
+0.8
-0.7
N.D.
-2.5
+0.2
stress
McCas_H2_complete Nitrofurantoin 0.1 mM
+1.3
-0.3
N.D.
-3.4
+0.3
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
+0.8
-0.8
N.D.
-2.1
+0.0
stress
McCas_H2_complete Strontium chloride 125 mM
+0.7
-0.4
N.D.
-2.2
-0.1
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
+1.1
-0.2
N.D.
-2.7
-0.1
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
+0.7
-0.3
N.D.
-2.6
+0.2
stress
McCas_H2_complete metronidazole 0.000833333333333333
+1.9
-0.9
N.D.
-2.0
-0.8
stress
McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM
+0.8
-0.9
N.D.
-2.2
+0.4
no stress control
McCas_H2_complete no stress control
+1.1
-0.7
N.D.
-2.1
-0.1
no stress control
McCas_H2_complete no stress control
+1.0
-0.9
N.D.
-2.3
+0.3
no stress control
McCas_H2_complete no stress control
+0.9
-0.1
N.D.
-2.5
-0.1
stress
McCas_H2_complete Phenazine ethosulfate 0.1 mM
+0.7
-0.7
N.D.
-2.0
+0.3
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
+1.1
+0.1
N.D.
-2.2
-0.2
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
+1.2
-0.8
N.D.
-2.0
+0.5
stress
McCas_H2_complete metavanadate 4.54545454545455 mM
+1.4
-0.3
N.D.
-2.0
-0.1
stress
McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM
+1.8
-0.7
N.D.
-1.4
+0.1
stress
McCas_H2_complete sodium nitrite 1.04166666666667 mM
+1.3
-0.5
N.D.
-1.3
+0.4
nitrogen source
H2 N-free with 10mM B-Alanine
+2.6
+0.1
N.D.
-0.8
+0.1
nutrient t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
-0.4
+0.7
N.D.
+2.5
+0.0
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