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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS03050 and MMP_RS03055 are separated by 9 nucleotides
MMP_RS03055 and MMP_RS03060 are separated by 94 nucleotides
MMP_RS03060 and MMP_RS03065 are separated by 144 nucleotides
MMP_RS03065 and MMP_RS03070 overlap by 8 nucleotides
MMP_RS03050: MMP_RS03050 - DUF115 domain-containing protein, at 575,501 to 576,217
_RS03050
MMP_RS03055: MMP_RS03055 - anaerobic ribonucleoside-triphosphate reductase activating protein, at 576,227 to 576,937
_RS03055
MMP_RS03060: MMP_RS03060 - MBL fold metallo-hydrolase, at 577,032 to 577,814
_RS03060
MMP_RS03065: MMP_RS03065 - AzlC family ABC transporter permease, at 577,959 to 578,675
_RS03065
MMP_RS03070: MMP_RS03070 - AzlD domain-containing protein, at 578,668 to 578,976
_RS03070
Group
Condition
MMP
_RS03050
MMP
_RS03055
MMP
_RS03060
MMP
_RS03065
MMP
_RS03070
nitrogen source
Mc_H2_N_Free L-Glutamine 10 mM
N.D.
N.D.
-0.4
-2.0
-0.2
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
N.D.
N.D.
-0.9
+0.6
-1.0
stress
McCas_H2_complete Irgasan 0.025 mM
N.D.
N.D.
-0.5
+0.6
-1.2
nitrogen source
Formate N-free with 2mM Adenosine
N.D.
N.D.
-0.4
-1.1
+0.4
stress
McCas_H2_complete Calcium Chloride Dihydrate 83.3333333333333 mM
N.D.
N.D.
-0.4
+0.4
-1.0
stress
McCas_H2_complete Chlorpromazine 0.0333333333333333 mM
N.D.
N.D.
-0.6
+0.5
-0.8
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
-0.1
+0.6
-1.3
stress
McCas_H2_complete silver chloride 0.5 mM
N.D.
N.D.
-0.6
+0.6
-0.8
stress
McCas_H2_complete Chloride 500 mM
N.D.
N.D.
-0.5
+0.6
-0.9
nitrogen source
H2 N-free with 10mM L-Methionine
N.D.
N.D.
-0.7
+0.7
-0.7
stress
McCas_H2_complete Spiramycin 0.1 mM
N.D.
N.D.
-0.9
+0.6
-0.3
stress
McCas_H2_complete Antimycin A 0.01 mM
N.D.
N.D.
-0.5
+0.8
-0.8
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
-0.4
+0.8
-0.8
stress
McCas_H2_complete Phenazine ethosulfate 0.1 mM
N.D.
N.D.
-0.5
+0.7
-0.7
stress
McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM
N.D.
N.D.
-0.3
+0.8
-0.9
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
-0.4
+1.0
-0.9
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
N.D.
N.D.
-0.3
+0.8
-0.7
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
-0.4
+1.1
-0.7
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
N.D.
N.D.
-0.3
+1.2
-0.8
stress
McCas_H2_complete Econazole nitrate salt 0.02 mM
N.D.
N.D.
+0.5
+0.6
-1.1
nutrient t2
H2 deepwell acetate FREE
N.D.
N.D.
-0.4
+1.0
-0.5
nitrogen source
H2 N-free with 2mM Adenosine
N.D.
N.D.
+0.5
-1.2
+0.9
stress
McCas_H2_complete sulfate 125 mM
N.D.
N.D.
-0.0
+1.3
-1.0
stress
McCas_H2_complete sodium nitrite 1.04166666666667 mM
N.D.
N.D.
-0.5
+1.3
-0.5
stress
McCas_H2_complete Nitrofurantoin 0.1 mM
N.D.
N.D.
-0.6
+1.3
-0.3
stress
McCas_H2_complete metronidazole 0.000833333333333333
N.D.
N.D.
-0.5
+1.9
-0.9
stress
McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM
N.D.
N.D.
-0.4
+1.8
-0.7
nutrient t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
N.D.
N.D.
+1.0
-0.4
+0.7
stress
McCas_H2_complete silver chloride 0.5 mM
N.D.
N.D.
-0.4
+1.7
+0.1
nitrogen source
H2 N-free with 10mM B-Alanine
N.D.
N.D.
-0.0
+2.6
+0.1
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