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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS02955 and MMP_RS02960 are separated by 61 nucleotides
MMP_RS02960 and MMP_RS02965 are separated by 13 nucleotides
MMP_RS02965 and MMP_RS02970 are separated by 334 nucleotides
MMP_RS02970 and MMP_RS02975 are separated by 150 nucleotides
MMP_RS02955: MMP_RS02955 - DJ-1/PfpI family protein, at 560,696 to 561,211
_RS02955
MMP_RS02960: MMP_RS02960 - class I SAM-dependent methyltransferase family protein, at 561,273 to 562,034
_RS02960
MMP_RS02965: MMP_RS02965 - carboxymuconolactone decarboxylase family protein, at 562,048 to 562,482
_RS02965
MMP_RS02970: MMP_RS02970 - hypothetical protein, at 562,817 to 563,107
_RS02970
MMP_RS02975: MMP_RS02975 - DUF2124 domain-containing protein, at 563,258 to 563,740
_RS02975
Group
Condition
MMP
_RS02955
MMP
_RS02960
MMP
_RS02965
MMP
_RS02970
MMP
_RS02975
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-0.7
-0.6
-1.8
-0.1
-0.2
nitrogen source
H2 N-free with 10mM L-Glutamic
-0.9
-0.9
-0.0
-0.5
-0.4
nitrogen source
H2 N-free with 10mM NAG
-1.6
-0.7
-0.1
+0.1
-0.2
nitrogen source
H2 N-free with 10mM L-Aspartic Acid
-1.3
-0.2
-0.0
-0.4
-0.6
nitrogen source
H2 N-free with 10mM L-Methionine
-1.4
-0.4
+0.1
-0.3
-0.6
nitrogen source
H2 N-free with 2mM Thymine
-1.4
-0.1
+0.1
-0.3
-0.7
nitrogen source
H2 N-free with 10mM L-Methionine
-1.2
-0.3
+0.5
-0.1
-0.5
nutrient t2
H2 deepwell acetate and casamino FREE
-0.3
-1.0
+0.7
-0.3
-0.4
nutrient t2
H2 deepwell acetate FREE
-0.6
-0.8
+0.6
+0.1
-0.6
nutrient t2
H2 deepwell acetate and casamino FREE
-0.6
-0.8
+0.9
-0.1
-0.2
stress
McCas_H2_complete Chloride 500 mM
-0.8
+0.2
+0.5
+0.3
-0.9
no stress control
McCas_H2_complete no stress control
-0.8
+0.7
+0.0
+0.6
-1.0
stress
McCas_formate_complete mercury (II) chloride 0.227272727272727 mM
-1.5
+0.5
-0.0
+0.1
+0.5
stress
McCas_H2_complete sodium bromide 250 mM
-0.7
+0.6
+0.5
+0.2
-0.8
stress
McCas_formate_complete Spiramycin 0.1 mM
-1.0
+0.5
+0.7
+0.2
-0.4
stress
McCas_H2_complete Nitrofurantoin 0.1 mM
-0.8
-0.0
+1.2
+0.3
-0.5
stress
McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
-0.0
+0.2
+1.7
-0.2
-1.1
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
-0.2
+0.1
+1.2
+0.3
-0.8
stress
McCas_formate_complete nitrate 35.7142857142857 mM
-0.8
+0.7
+0.6
-0.2
+0.6
nitrogen source
H2 N-free with 2mM Adenosine
+1.4
-0.6
-0.9
+0.5
+0.7
stress
McCas_formate_complete sulfate 125 mM
+0.3
+0.4
+1.5
-0.3
-0.3
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
+1.8
+0.5
+0.2
+0.3
-0.8
stress
McCas_formate_complete Polymyxin B sulfate 0.1 mM
+1.4
+0.7
+0.2
-0.1
-0.2
stress
McCas_formate_complete arsenate 0.416666666666667 mM
+0.6
+0.7
+0.6
-0.2
+0.5
stress
Formate 100 mM hypophosphite
+0.3
+2.4
-0.2
+0.0
-0.2
stress
Formate 100 mM hypophosphite
+0.3
+2.2
-0.0
+0.1
+0.0
stress
McCas_formate_complete arsenate 0.416666666666667 mM
+0.1
+0.4
+1.7
-0.2
+0.6
stress
McCas_formate_complete dimetridazole 0.00416666666666667 mM
-0.0
+1.4
+1.8
-0.6
-0.0
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
+0.9
+0.5
+1.0
-0.4
+0.7
stress
McCas_formate_complete hypophosphite 125 mM
+2.3
+0.3
+0.7
+0.3
-0.1
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