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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS02880 and MMP_RS02885 are separated by 26 nucleotides
MMP_RS02885 and MMP_RS02890 are separated by 216 nucleotides
MMP_RS02890 and MMP_RS02895 are separated by 61 nucleotides
MMP_RS02895 and MMP_RS02900 are separated by 75 nucleotides
MMP_RS02880: MMP_RS02880 - AmmeMemoRadiSam system radical SAM enzyme, at 547,714 to 548,724
_RS02880
MMP_RS02885: MMP_RS02885 - molybdopterin biosynthesis protein, at 548,751 to 550,601
_RS02885
MMP_RS02890: MMP_RS02890 - TIGR00296 family protein, at 550,818 to 551,429
_RS02890
MMP_RS02895: MMP_RS02895 - DHH family phosphoesterase, at 551,491 to 552,786
_RS02895
MMP_RS02900: MMP_RS02900 - imidazoleglycerol-phosphate dehydratase HisB, at 552,862 to 553,434
_RS02900
Group
Condition
MMP
_RS02880
MMP
_RS02885
MMP
_RS02890
MMP
_RS02895
MMP
_RS02900
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations
-1.9
-4.6
-0.3
+0.3
-4.8
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations
-1.9
-4.8
-0.0
+0.2
-4.7
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations
-1.9
-4.3
+0.0
+0.1
-4.7
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations
-1.8
-4.2
-0.0
+0.3
-4.9
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations
-1.7
-4.4
-0.2
+0.3
-4.7
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-1.1
-5.3
-0.1
+0.5
-4.1
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations
-1.7
-3.8
+0.0
+0.2
-4.7
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-1.0
-4.6
+0.1
+0.5
-4.5
rich t2
H2 McCas, 5g/L bicarb, 40 psi H2CO2
+0.1
-3.8
-0.0
-0.1
-4.9
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
-1.1
-3.1
+0.0
+0.2
-4.4
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 10 generations
-1.1
-2.2
-0.1
+0.2
-4.8
no stress control
McCas_formate_complete no stress control
+1.0
+2.4
+0.3
+0.5
-4.9
no stress control
McCas_formate_complete no stress control
+1.2
+2.9
+0.1
-0.1
-4.6
stress
McCas_formate_complete Cesium chloride 41.6666666666667 mM
+1.0
+3.2
+0.2
-0.1
-4.1
no stress control
McCas_formate_complete no stress control
+1.1
+2.8
+0.1
+0.5
-4.0
no stress control
McCas_formate_complete no stress control
+1.2
+3.1
+0.1
+0.2
-4.0
stress
McCas_formate_complete Novobiocin 0.025 mM
+1.5
+2.9
+0.1
+0.4
-4.0
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
+1.5
+4.0
+0.4
-0.3
-4.6
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
+1.5
+3.8
+0.2
+0.7
-4.5
stress
McCas_formate_complete sulfate 125 mM
+1.6
+4.1
+0.6
+0.4
-4.5
stress
McCas_formate_complete arsenate 0.416666666666667 mM
+1.6
+4.0
+0.4
+0.4
-3.9
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
+2.0
+3.8
-0.1
-0.1
-2.7
stress
McCas_formate_complete nitrate 35.7142857142857 mM
+0.7
+5.2
-0.4
-0.6
-1.8
stress
McCas_formate_complete arsenate 0.416666666666667 mM
+1.7
+4.1
+0.3
+0.5
-3.0
stress
McCas_formate_complete dimetridazole 0.00416666666666667 mM
+1.7
+4.4
+0.4
-0.2
-1.8
stress
McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
+1.7
+4.1
+0.5
+0.9
-2.7
stress
McCas_formate_complete sulfate 125 mM
+1.8
+4.2
-0.2
+0.8
-1.4
nitrogen source
H2 N-free with 10mM Parabanic Acid
+0.2
+6.8
-0.3
-0.9
-0.5
stress
H2 50 mM hypophosphite
+0.4
+7.2
+0.1
+0.6
+0.7
stress
McCas_formate_complete Fluorophosphate 62.5 mM
+1.3
+3.2
+0.6
+0.8
+3.4
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