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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS02840 and MMP_RS02845 are separated by 94 nucleotides
MMP_RS02845 and MMP_RS02850 are separated by 164 nucleotides
MMP_RS02850 and MMP_RS02855 are separated by 180 nucleotides
MMP_RS02855 and MMP_RS02860 are separated by 98 nucleotides
MMP_RS02840: MMP_RS02840 - DUF123 domain-containing protein, at 541,501 to 542,571
_RS02840
MMP_RS02845: MMP_RS02845 - hypothetical protein, at 542,666 to 543,277
_RS02845
MMP_RS02850: MMP_RS02850 - hypothetical protein, at 543,442 to 543,732
_RS02850
MMP_RS02855: MMP_RS02855 - 3-isopropylmalate dehydrogenase, at 543,913 to 544,905
_RS02855
MMP_RS02860: MMP_RS02860 - phosphoribosylaminoimidazolesuccinocarboxamide synthase, at 545,004 to 545,744
_RS02860
Group
Condition
MMP
_RS02840
MMP
_RS02845
MMP
_RS02850
MMP
_RS02855
MMP
_RS02860
nitrogen source
H2 N-free with 10mM L-tyrosine
-0.8
-0.4
-0.6
N.D.
N.D.
no stress control
McCas_formate_complete no stress control
-1.0
-0.0
-0.3
N.D.
N.D.
stress
McCas_formate_complete Calcium Chloride Dihydrate 166.666666666667 mM
-1.0
+0.0
-0.3
N.D.
N.D.
stress
McCas_formate_complete Rifampicin 0.5 mM
-1.0
-0.2
-0.0
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Cytidine
-1.2
+0.0
+0.0
N.D.
N.D.
nitrogen source
H2 N-free with 10mM NAG
-0.9
-0.1
-0.0
N.D.
N.D.
stress
McCas_formate_complete 3-nitroxypropanol 0.0015625 mM
-0.9
-0.1
-0.1
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-tyrosine
-0.9
-0.0
-0.1
N.D.
N.D.
stress
McCas_formate_complete phosphite 100 mM
-0.6
-0.1
-0.3
N.D.
N.D.
stress
McCas_formate_complete silver chloride 0.5 mM
-0.8
+0.0
-0.1
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Cytidine
-0.8
-0.1
+0.1
N.D.
N.D.
stress
McCas_formate_complete 2-bromoethanesulfonic 0.1 mM
-0.9
+0.1
-0.0
N.D.
N.D.
stress
McCas_formate_complete sulfate 125 mM
-0.8
-0.1
+0.1
N.D.
N.D.
stress
McCas_formate_complete Rifampicin 0.5 mM
-0.7
-0.2
+0.2
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Arginine
-0.5
+0.2
-0.3
N.D.
N.D.
nitrogen source
H2 N-free with 5mM Inosine
-0.5
+0.3
-0.3
N.D.
N.D.
stress
McCas_formate_complete arsenate 0.416666666666667 mM
-0.7
+0.3
-0.0
N.D.
N.D.
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
-0.8
+0.2
+0.4
N.D.
N.D.
nutrient t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
-0.4
-0.1
+0.4
N.D.
N.D.
stress
McCas_H2_complete Rifampicin 0.5 mM
+0.5
-0.3
+0.2
N.D.
N.D.
nutrient t1
Mc formate, casamino free, with 10mM L-Ornithine
+0.3
+0.4
-0.3
N.D.
N.D.
stress
McCas_H2_complete Hydroxylamine 41.6666666666667 mM
+0.5
+0.3
-0.3
N.D.
N.D.
stress
McCas_H2_complete bromate 50 mM
+0.6
+0.1
-0.3
N.D.
N.D.
stress
McCas_H2_complete sodium bromide 250 mM
+0.5
+0.3
-0.2
N.D.
N.D.
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
+0.4
+0.5
+0.1
N.D.
N.D.
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
+0.3
+0.6
+0.1
N.D.
N.D.
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
+0.6
+0.6
-0.1
N.D.
N.D.
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
+0.6
+0.0
+0.4
N.D.
N.D.
stress
McCas_H2_complete Thioridazine 0.1 mM
+0.8
+0.4
-0.2
N.D.
N.D.
stress
McCas_H2_complete Chlorate 250 mM
+1.1
+0.2
+0.3
N.D.
N.D.
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