Fitness for 5 genes in Methanococcus maripaludis S2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MMP_RS02800	MMP_RS02805	MMP_RS02810	MMP_RS02815	MMP_RS02820
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations	-6.2	-0.5	-0.1	-0.2	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations	-6.3	-0.8	+0.2	-0.1	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations	-6.5	-0.2	+0.0	-0.2	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations	-6.0	+0.0	+0.2	-0.7	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations	-6.4	+0.3	-0.0	-0.2	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations	-6.7	+0.1	+0.1	+0.2	N.D.
stress	McCas_formate_complete Chloride 250 mM	+0.2	-6.7	-0.2	+0.7	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations	-5.8	-0.3	+0.0	+0.1	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations	-5.1	-0.7	+0.1	-0.1	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations	-6.1	-0.6	+0.5	+0.5	N.D.
stress	McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM	-1.1	-3.9	-0.1	-0.4	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations	-5.6	-0.0	-0.1	+0.3	N.D.
nutrient t2	H2 deepwell acetate and vitamin FREE	-4.3	-0.9	+0.6	-0.6	N.D.
nitrogen source	H2 N-free with 10mM L-Methionine	-3.6	-0.7	+0.2	-0.9	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 10 generations	-4.2	-0.9	+0.2	+0.1	N.D.
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations	-4.9	-0.4	+0.3	+0.2	N.D.
rich t2	H2 McCas, 5g/L bicarb, 40 psi H2CO2	-4.6	-0.1	+0.2	-0.2	N.D.
nutrient t1	Mc formate, casamino free, with 10mM L-Methionine	-3.5	-1.3	+0.0	+0.3	N.D.
stress	H2 50 mM hypophosphite	+1.4	-3.7	-0.2	-0.8	N.D.
nutrient t2	H2 deepwell acetate and vitamin FREE	-3.7	+1.2	-0.3	-0.4	N.D.
stress	McCas_formate_complete gold (III) chloride 0.0714285714285714 mM	-3.5	+1.4	+0.2	-1.2	N.D.
nutrient t2	H2 deepwell vitamin FREE	-3.9	+1.4	+0.3	-0.2	N.D.
stress	McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM	-2.9	-0.6	+0.2	+1.3	N.D.
rich t2	H2 McCas deepwell complete	-2.9	-0.6	+0.4	+1.2	N.D.
nitrogen source	H2 N-free with 2g/L casaminos	-3.0	+1.5	+0.1	+0.4	N.D.
no stress control	McCas_H2_complete no stress control	-2.5	+1.1	+0.4	+1.0	N.D.
stress	McCas_H2_complete Benzethonium chloride 0.003125 mM	-2.7	+1.2	+0.7	+0.9	N.D.
natural competence	H2 McCas- cells grown in liquid medium with neomycin	+4.7	-0.5	-0.1	-0.3	N.D.
natural competence	H2 McCas- cells incubated with 5000 ng DNA (pDNA pLW40neo) then transferred and grown in liquid medium with neomycin	+5.9	+0.1	-0.1	-0.1	N.D.
natural competence	H2 McCas- cells grown in liquid medium with neomycin	+5.8	-0.2	+0.3	+0.5	N.D.