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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS02770 and MMP_RS02775 are separated by 40 nucleotides
MMP_RS02775 and MMP_RS02780 are separated by 515 nucleotides
MMP_RS02780 and MMP_RS02785 are separated by 13 nucleotides
MMP_RS02785 and MMP_RS02790 are separated by 1 nucleotides
MMP_RS02770: MMP_RS02770 - hypothetical protein, at 530,045 to 530,620
_RS02770
MMP_RS02775: MMP_RS02775 - hypothetical protein, at 530,661 to 531,122
_RS02775
MMP_RS02780: MMP_RS02780 - hypothetical protein, at 531,638 to 532,351
_RS02780
MMP_RS02785: MMP_RS02785 - MarR family transcriptional regulator, at 532,365 to 532,985
_RS02785
MMP_RS02790: MMP_RS02790 - class III signal peptide-containing protein, at 532,987 to 533,208
_RS02790
Group
Condition
MMP
_RS02770
MMP
_RS02775
MMP
_RS02780
MMP
_RS02785
MMP
_RS02790
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations
-0.9
-1.2
-0.7
-1.4
-0.8
nitrogen source
H2 N-free with 10mM L-Methionine
+0.0
-0.1
-1.8
-0.5
-1.1
nitrogen source
H2 N-free with 10mM Parabanic Acid
-0.2
-0.0
-1.6
-0.4
-1.2
nitrogen source
H2 N-free with 10mM L-Glutamic
+0.0
+0.3
-2.0
-0.5
-1.2
nitrogen source
H2 N-free with 10mM L-Leucine
+0.1
-0.0
-2.1
-0.1
-1.2
nitrogen source
H2 N-free with 10mM L-Arginine
-0.2
+0.1
-2.1
-0.3
-0.8
nitrogen source
H2 N-free with 10mM L-Proline
-0.4
+0.2
-1.7
-0.4
-0.9
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
+0.2
-0.2
-0.8
-0.1
-2.4
nitrogen source
H2 N-free with 10mM L-Citrulline
-0.1
+0.2
-1.9
-0.2
-1.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 10 generations
-0.6
-0.8
-0.4
-1.2
+0.0
nitrogen source
H2 N-free with 10mM L-Phenylalanine
-0.1
+0.2
-1.8
-0.5
-0.7
nitrogen source
H2 N-free with 10mM Gly-Glu
+0.1
+0.0
-1.7
-0.1
-1.4
nitrogen source
N2 fixation, H2 media
+0.1
+0.2
-1.7
-0.5
-1.1
nitrogen source
H2 N-free with 10mM L-tyrosine
-0.3
+0.5
-0.7
-0.4
-2.0
nitrogen source
H2 N-free with 10mM L-Lysine
+0.2
-0.0
-1.8
-0.0
-1.1
nitrogen source
H2 N-free with 10mM L-Methionine
+0.3
-0.3
-1.9
-0.1
-0.7
nitrogen source
H2 N-free with 10mM L-Arginine
+0.4
+0.1
-1.9
-0.0
-1.2
nutrient t2
H2 deepwell acetate and casamino FREE
+0.4
-0.4
-0.6
-0.0
-1.8
nutrient t2
H2 deepwell casamino FREE
+0.3
+0.0
-1.2
-0.2
-1.4
stress
McCas_formate_complete Chloride 250 mM
+0.4
-0.2
+0.3
-0.1
-2.7
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations
-0.6
-0.8
-0.7
-0.9
+0.7
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
+0.3
-0.8
-1.4
-0.6
+0.5
nitrogen source
H2 N-free with 10mM L-Valine
+0.4
-0.1
-2.0
-0.5
+0.4
stress
McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
-0.1
+0.4
+0.3
+0.2
-2.3
nitrogen source
H2 N-free with 10mM Cytidine
+0.4
+0.2
-2.0
-0.3
+0.5
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
+0.3
+0.2
-0.7
-0.2
+2.2
nitrogen source
H2 N-free with 10mM L-Serine
+0.1
-0.0
-0.1
-0.3
+3.0
stress
McCas_formate_complete Rifampicin 0.5 mM
+0.1
+0.3
+1.8
-0.3
+2.0
stress
Formate with Bacitracin 15.6 uM
+0.0
+1.3
+10.4
-0.6
+1.6
stress
Formate with Bacitracin 15.6 uM
+1.1
+1.4
+10.0
-0.6
+1.1
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